RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 LARP4BQ92615 738 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-234ENST00000584525 CCSER1Q9C0I3 900 aa14.34□□□□□ -0.11
CDK5RAP3-234ENST00000584525 KMT5AQ9NQR1 393 aa14.34□□□□□ -0.11
CDK5RAP3-234ENST00000584525 ZSCAN32Q9NX65 697 aa14.34□□□□□ -0.11
CDK5RAP3-234ENST00000584525 GDE1Q9NZC3 331 aa14.34□□□□□ -0.11
CDK5RAP3-234ENST00000584525 STK17AQ9UEE5 414 aa14.34□□□□□ -0.11
CDK5RAP3-234ENST00000584525 BACE2Q9Y5Z0 518 aa14.34□□□□□ -0.11
CDK5RAP3-234ENST00000584525 TMEM189-UBE2V1I3L0A0 370 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 I3L4J1 428 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TRAPPC3O43617 180 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TKTP29401 623 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ELF1P32519 619 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 EFNA5P52803 228 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PEX3P56589 373 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DNM1Q05193 864 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GRIN1Q05586 938 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PKP1Q13835 747 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SLC5A9Q2M3M2 681 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TSSK4Q6SA08 328 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ANKS3Q6ZW76 656 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GPR161Q8N6U8 529 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 RAD54LQ92698 747 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 EPSTI1Q96J88 318 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SPATA32Q96LK8 384 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 UROC1Q96N76 676 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 KIFC3Q9BVG8 833 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PLA2G2FQ9BZM2 168 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CCDC113Q9H0I3 377 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 POLD4Q9HCU8 107 aa14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 LARSQ9P2J5 1176 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MRPS17Q9Y2R5 130 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-234ENST00000584525 H0YCG3 227 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PRRG1O14668 218 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 LRG1P02750 347 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 EDN1P05305 212 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SDHBP21912 280 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GUCY2CP25092 1073 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 BRCC3P46736 316 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ARPP19P56211 112 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 STRN3Q13033 797 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 UPP1Q16831 310 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ATF7IP2Q5U623 682 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TANGO2Q6ICL3 276 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SV2BQ7L1I2 683 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 KCNK18Q7Z418 384 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CLDN23Q96B33 292 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PPP1R10Q96QC0 940 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 RUSC1Q9BVN2 902 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 LRRC27Q9C0I9 530 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 C17orf75Q9HAS0 396 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GOLGA2P5Q9HBQ8 144 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 HEBP1Q9NRV9 189 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SMG5Q9UPR3 1016 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MORC2Q9Y6X9 1032 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GPR179Q6PRD1 2367 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 NCOR2Q9Y618 2525 aa14.32□□□□□ -0.12
CDK5RAP3-234ENST00000584525 K7ERI5 159 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CEBPBP17676 345 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PTPN2P17706 415 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 RPS9P46781 194 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SLC12A3P55017 1021 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ADCY1Q08828 1119 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MCM6Q14566 821 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 NT5DC1Q5TFE4 455 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CD300LGQ6UXG3 332 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PDILTQ8N807 584 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ZBTB44Q8NCP5 570 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ZNF461Q8TAF7 563 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ELSPBP1Q96BH3 223 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DDX27Q96GQ7 796 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CORO1BQ9BR76 489 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PYM1Q9BRP8 204 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 PANK2Q9BZ23 570 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 EPC1Q9H2F5 836 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CYP4F11Q9HBI6 524 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ODF2LQ9ULJ1 636 aa14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 NDRG2Q9UN36 371 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 RBM19Q9Y4C8 960 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-234ENST00000584525 OTOGLQ3ZCN5 2332 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SMIM28A0A1B0GU29 152 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GOLGA6L4A6NEF3 574 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TBC1D4O60343 1298 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 DDIT3P35638 169 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MATR3P43243 847 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ATXN1P54253 815 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ROR1Q01973 937 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MTAPQ13126 283 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 GRM2Q14416 872 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 C1orf186Q6ZWK4 172 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 MYCT1Q8N699 235 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 C3orf58Q8NDZ4 430 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 BICD1Q96G01 975 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 CCDC94Q9BW85 323 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 SCAND2PQ9GZW5 306 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 BRD9Q9H8M2 597 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 ZFP14Q9HCL3 533 aa14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 AVENQ9NQS1 362 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-234ENST00000584525 TOPORSQ9NS56 1045 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms