RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 MKNK1Q9BUB5 465 aa17.31■□□□□ 0.36
CSNK1D-223ENST00000584472 ZBP1Q9H171 429 aa17.31■□□□□ 0.36
CSNK1D-223ENST00000584472 FRMD4BQ9Y2L6 1034 aa17.31■□□□□ 0.36
CSNK1D-223ENST00000584472 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 SMTNL1A8MU46 457 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 MAPK13O15264 365 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 EFEMP2O95967 443 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 PPP2R3AQ06190 1150 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 ADAM15Q13444 863 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 TMC7Q7Z402 723 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 IRF2BP1Q8IU81 584 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 BRSK2Q8IWQ3 736 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 CD302Q8IX05 232 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 FAM186BQ8IYM0 893 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 EFHBQ8N7U6 833 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 ZMAT2Q96NC0 199 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 VN1R3Q9BXE9 311 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 THAP9Q9H5L6 903 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 RPF1Q9H9Y2 349 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 SAMSN1Q9NSI8 373 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 CLDND1Q9NY35 253 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 RBAKQ9NYW8 714 aaPredicted RBP17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 ADAM28Q9UKQ2 775 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 IRAK3Q9Y616 596 aa17.3■□□□□ 0.36
CSNK1D-223ENST00000584472 BECN2A8MW95 431 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 TMEM189-UBE2V1I3L0A0 370 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 CSPG5O95196 566 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 GNA14O95837 355 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 CTSAP10619 480 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 EPB41P11171 864 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 PLPP4Q5VZY2 271 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 LUZP1Q86V48 1076 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 RNF168Q8IYW5 571 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 MRPL43Q8N983 215 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 DDX27Q96GQ7 796 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 BORCS6Q96GS4 357 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 MFSD14AQ96MC6 490 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 FANCLQ9NW38 375 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 PCDHGC5Q9Y5F6 944 aa17.29■□□□□ 0.36
CSNK1D-223ENST00000584472 SF3B1O75533 1304 aaKnown RBP eCLIP17.28■□□□□ 0.366e-7■■■■■ 43.1
CSNK1D-223ENST00000584472 F8W810 466 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 SOD2P04179 222 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 RPL9P32969 192 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 MARSP56192 900 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 WNT7BP56706 349 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 CYP24A1Q07973 514 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 SMAD4Q13485 552 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 SMAD2Q15796 467 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 UPP1Q16831 310 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 CDKAL1Q5VV42 579 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 ADGRD2Q7Z7M1 963 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 GAS2L3Q86XJ1 694 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 GPR65Q8IYL9 337 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 GJD3Q8N144 294 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 CNOT6LQ96LI5 555 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 POP1Q99575 1024 aaKnown RBP17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 PAAF1Q9BRP4 392 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 HERC2P3Q9BVR0 1158 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 ASB7Q9H672 318 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 TLE6Q9H808 572 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 DERAQ9Y315 318 aa17.28■□□□□ 0.36
CSNK1D-223ENST00000584472 C2orf71A6NGG8 1288 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 HIDE1A8MVS5 230 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 LACTBL1A8MY62 500 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 PI4K2BG5E9Z4 385 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 H3BQ06 376 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 XPOTO43592 962 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 TADA2AO75478 443 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 KIF4AO95239 1232 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 IL18RAPO95256 599 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 IL9P15248 144 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 CYP3A5P20815 502 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 NRIP1P48552 1158 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 MCCD1P59942 119 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 SOX4Q06945 474 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 ELAVL2Q12926 359 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 PSMD6Q15008 389 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 ZBTB6Q15916 424 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 DUSP6Q16828 381 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 CCDC40Q4G0X9 1142 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 HSP90AA4PQ58FG1 418 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 FUT10Q6P4F1 479 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 DCLRE1AQ6PJP8 1040 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 INTS8Q75QN2 995 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 FAM114A1Q8IWE2 563 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 ADHFE1Q8IWW8 467 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 PLEKHO2Q8TD55 490 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 KIF12Q96FN5 646 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 MSLNLQ96KJ4 702 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 METTL14Q9HCE5 456 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 ARMCX3Q9UH62 379 aaPredicted RBP17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 SSX2IPQ9Y2D8 614 aa17.27■□□□□ 0.36
CSNK1D-223ENST00000584472 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
CSNK1D-223ENST00000584472 TBX10O75333 385 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms