RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 RGMAQ96B86 450 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 AGAP2Q99490 1192 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 MYOCQ99972 504 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 WDCPQ9H6R7 721 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 OBP2AQ9NY56 170 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 TRPM5Q9NZQ8 1165 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 POGKQ9P215 609 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 FZD1Q9UP38 647 aa5.06□□□□□ -1.6
PPP4R1-227ENST00000583988 A0A088AWK7 358 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 LEFTY2O00292 366 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 FOXN1O15353 648 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 CAND2O75155 1236 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 TUSC2O75896 110 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 POMCP01189 267 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 ITGB1P05556 798 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 MTHFD1P11586 935 aaKnown RBP5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 GPSM2P81274 684 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 PURAQ00577 322 aaKnown RBP5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 PTPAQ15257 358 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 TIGD2Q4W5G0 525 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 ARHGAP29Q52LW3 1261 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 LY6G5CQ5SRR4 150 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 CCSAPQ6IQ19 270 aaPredicted RBP5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 GADL1Q6ZQY3 521 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 GRAMD1CQ8IYS0 662 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 OR10H5Q8NGA6 315 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 TTC17Q96AE7 1141 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 TMX3Q96JJ7 454 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 DCLRE1CQ96SD1 692 aaKnown RBP5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 ACO2Q99798 780 aaKnown RBP5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 C11orf54Q9H0W9 315 aaPredicted RBP5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 TMEM60Q9H2L4 133 aa5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 GNL3LQ9NVN8 582 aaKnown RBP5.05□□□□□ -1.6
PPP4R1-227ENST00000583988 AHRRA9YTQ3 701 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 FAM227AF5H4B4 570 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 FTLP02792 175 aaPredicted RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 ALAS1P13196 640 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 LAG3P18627 525 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 MALP21145 153 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 AGFG1P52594 562 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 ZNF280AP59817 542 aaPredicted RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 NKX6-1P78426 367 aaPredicted RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 FAM189BP81408 668 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 NHLH2Q02577 135 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 CREMQ03060 361 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 NOGQ13253 232 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 ZNF267Q14586 743 aaPredicted RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 ANO6Q4KMQ2 910 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 KHDC1Q4VXA5 237 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 PABPC1LQ4VXU2 614 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 FAM102AQ5T9C2 384 aaPredicted RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 ZNF529Q6P280 563 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 PCSK4Q6UW60 755 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 LRRC55Q6ZSA7 311 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 RHOUQ7L0Q8 258 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 CAMKK1Q8N5S9 505 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 DCBLD1Q8N8Z6 715 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 RNF169Q8NCN4 708 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 RAB24Q969Q5 203 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 ZG16BQ96DA0 208 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 LRGUKQ96M69 825 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 FAM204AQ9H8W3 233 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 GABBR1Q9UBS5 961 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 RUVBL1Q9Y265 456 aaKnown RBP5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 STXBP5LQ9Y2K9 1186 aa5.04□□□□□ -1.6
PPP4R1-227ENST00000583988 TCRBV7S2A1N4TA0A589 114 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 VSTM5A8MXK1 200 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 PRC1O43663 620 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 B3GALT2O43825 422 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 LPXNO60711 386 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 NCR1O76036 304 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 UBXN7O94888 489 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 ANXA1P04083 346 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 ZFP36P26651 326 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 MAP2K6P52564 334 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 CHN2P52757 468 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 RNASE9P60153 205 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 RAP2BP61225 183 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 SNAPC2Q13487 334 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 MED25Q71SY5 747 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 UBE3BQ7Z3V4 1068 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 GDF7Q7Z4P5 450 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 KLHDC4Q8TBB5 520 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 FBXO41Q8TF61 875 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 MTFMTQ96DP5 389 aaKnown RBP5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 CGRRF1Q99675 332 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 VRK1Q99986 396 aaPredicted RBP5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 SLC46A2Q9BY10 475 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 GSTO2Q9H4Y5 243 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 PNPOQ9NVS9 261 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 RLIMQ9NVW2 624 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 FBXO34Q9NWN3 711 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 CHST2Q9Y4C5 530 aa5.03□□□□□ -1.6
PPP4R1-227ENST00000583988 NT5C1B-RDH14C9J2C7 533 aa5.02□□□□□ -1.61
PPP4R1-227ENST00000583988 PPFIA4O75335 1185 aa5.02□□□□□ -1.61
PPP4R1-227ENST00000583988 ZBED1O96006 694 aa5.02□□□□□ -1.61
PPP4R1-227ENST00000583988 GCP02774 474 aa5.02□□□□□ -1.61
PPP4R1-227ENST00000583988 ALDH2P05091 517 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms