RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ADRB2P07550 413 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 PRR29P0C7W0 189 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 PSMD2Q13200 908 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 KMT5BQ4FZB7 885 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 ZBTB41Q5SVQ8 909 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 CLEC17AQ6ZS10 378 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 SYCP3Q8IZU3 236 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 SCFD1Q8WVM8 642 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 RABGGTAQ92696 567 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 TIGD1Q96MW7 591 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 ZMAT2Q96NC0 199 aaKnown RBP27.04■■□□□ 1.92
TSEN54-209ENST00000583454 PAAF1Q9BRP4 392 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 COLEC11Q9BWP8 271 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 RHOBTB2Q9BYZ6 727 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 PLEKHA5Q9HAU0 1116 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 CPSF3Q9UKF6 684 aaKnown RBP27.04■■□□□ 1.92
TSEN54-209ENST00000583454 ADAM28Q9UKQ2 775 aa27.04■■□□□ 1.92
TSEN54-209ENST00000583454 AGO2Q9UKV8 859 aaKnown RBP27.04■■□□□ 1.92
TSEN54-209ENST00000583454 NR1I2O75469 434 aa27.03■■□□□ 1.92
TSEN54-209ENST00000583454 UBE4BO95155 1302 aa27.03■■□□□ 1.92
TSEN54-209ENST00000583454 RPN1P04843 607 aaKnown RBP27.03■■□□□ 1.92
TSEN54-209ENST00000583454 TNFSF9P41273 254 aa27.03■■□□□ 1.92
TSEN54-209ENST00000583454 GPR65Q8IYL9 337 aa27.03■■□□□ 1.92
TSEN54-209ENST00000583454 ZNF707Q96C28 371 aaPredicted RBP27.03■■□□□ 1.92
TSEN54-209ENST00000583454 CCDC34Q96HJ3 373 aa27.03■■□□□ 1.92
TSEN54-209ENST00000583454 SLC39A2Q9NP94 309 aa27.03■■□□□ 1.92
TSEN54-209ENST00000583454 EXOC1Q9NV70 894 aa27.03■■□□□ 1.92
TSEN54-209ENST00000583454 PDCD11Q14690 1871 aaKnown RBP27.02■■□□□ 1.92
TSEN54-209ENST00000583454 TTC26A0AVF1 554 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 RFPL2O75678 378 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 GLUD1P00367 558 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 CXCL8P10145 99 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 GARTP22102 1010 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 POU5F1Q01860 360 aaKnown RBP27.02■■□□□ 1.92
TSEN54-209ENST00000583454 STK4Q13043 487 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 ENOX2Q16206 610 aaKnown RBP27.02■■□□□ 1.92
TSEN54-209ENST00000583454 BMT2Q1RMZ1 405 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 GLRA4Q5JXX5 417 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 OTOP3Q7RTS5 596 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 POMGNT1Q8WZA1 660 aa27.02■■□□□ 1.92
TSEN54-209ENST00000583454 C1RP00736 705 aa27.01■■□□□ 1.91
TSEN54-209ENST00000583454 LILRA6Q6PI73 481 aa27.01■■□□□ 1.91
TSEN54-209ENST00000583454 TMEM105Q8N8V8 129 aa27.01■■□□□ 1.91
TSEN54-209ENST00000583454 ACSF2Q96CM8 615 aaPredicted RBP27.01■■□□□ 1.91
TSEN54-209ENST00000583454 RPF1Q9H9Y2 349 aaKnown RBP27.01■■□□□ 1.91
TSEN54-209ENST00000583454 FNIP2Q9P278 1114 aa27.01■■□□□ 1.91
TSEN54-209ENST00000583454 CCDC195A0A1B0GUA6 201 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 SPDYE4A6NLX3 237 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 RHOBTB3O94955 611 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 SPATA31D3P0C874 917 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 ACOT2P49753 483 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 USP41Q3LFD5 358 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 CRELD2Q6UXH1 353 aaPredicted RBP27■■□□□ 1.91
TSEN54-209ENST00000583454 SPATA31D4Q6ZUB0 917 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 ELOA2Q8IYF1 753 aaPredicted RBP27■■□□□ 1.91
TSEN54-209ENST00000583454 KIAA0895Q8NCT3 520 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 HDAC7Q8WUI4 952 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 WDR6Q9NNW5 1121 aaKnown RBP27■■□□□ 1.91
TSEN54-209ENST00000583454 SLC38A7Q9NVC3 462 aa27■■□□□ 1.91
TSEN54-209ENST00000583454 CASTOR2A6NHX0 329 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 LACTBL1A8MY62 500 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 TGM5O43548 720 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 SOX4Q06945 474 aaPredicted RBP26.99■■□□□ 1.91
TSEN54-209ENST00000583454 HSP90AA2PQ14568 343 aaPredicted RBP26.99■■□□□ 1.91
TSEN54-209ENST00000583454 KCNB1Q14721 858 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 RTP2Q5QGT7 225 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 CYP26C1Q6V0L0 522 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 PALB2Q86YC2 1186 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 TSPAN18Q96SJ8 248 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 CBWD1Q9BRT8 395 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 KCNK12Q9HB15 430 aa26.99■■□□□ 1.91
TSEN54-209ENST00000583454 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.99■■□□□ 1.91
TSEN54-209ENST00000583454 ANK1P16157 1881 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 CLUHO75153 1309 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 TGFB1I1O43294 461 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 KIF4AO95239 1232 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 RPL17P18621 184 aaKnown RBP26.98■■□□□ 1.91
TSEN54-209ENST00000583454 NUBP1P53384 320 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 UBE2HP62256 183 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 SNRPFP62306 86 aaKnown RBP26.98■■□□□ 1.91
TSEN54-209ENST00000583454 ZBTB6Q15916 424 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 CD302Q8IX05 232 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 RIN2Q8WYP3 895 aaPredicted RBP26.98■■□□□ 1.91
TSEN54-209ENST00000583454 CCDC47Q96A33 483 aaKnown RBP26.98■■□□□ 1.91
TSEN54-209ENST00000583454 UROC1Q96N76 676 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 FAM86C1Q9NVL1 165 aa26.98■■□□□ 1.91
TSEN54-209ENST00000583454 PPP2R3AQ06190 1150 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 PNOCQ13519 176 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 TDGQ13569 410 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 CWF19L1Q69YN2 538 aaKnown RBP26.97■■□□□ 1.91
TSEN54-209ENST00000583454 DCLRE1AQ6PJP8 1040 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 PRSS55Q6UWB4 352 aaPredicted RBP26.97■■□□□ 1.91
TSEN54-209ENST00000583454 ZSWIM2Q8NEG5 633 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 PLEKHA4Q9H4M7 779 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 DPP7Q9UHL4 492 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 DUSP12Q9UNI6 340 aa26.97■■□□□ 1.91
TSEN54-209ENST00000583454 SF3B1O75533 1304 aaKnown RBP eCLIP26.96■■□□□ 1.91
TSEN54-209ENST00000583454 KIAA0391O15091 583 aaKnown RBP26.96■■□□□ 1.91
TSEN54-209ENST00000583454 GALR2O43603 387 aaPredicted RBP26.96■■□□□ 1.91
TSEN54-209ENST00000583454 PRPF40AO75400 957 aaKnown RBP26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms