RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 SPTLC1O15269 473 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 DLG4P78352 724 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 ELAVL2Q12926 359 aaKnown RBP23.39■■□□□ 1.33
TSEN54-208ENST00000583173 COL19A1Q14993 1142 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 PTPN14Q15678 1187 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 USP41Q3LFD5 358 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 TCEAL5Q5H9L2 206 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 FILIP1Q7Z7B0 1213 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 AUTS2Q8WXX7 1259 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 EEF2KMTQ96G04 330 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 SUSD3Q96L08 255 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 NSUN3Q9H649 340 aaKnown RBP23.39■■□□□ 1.33
TSEN54-208ENST00000583173 RXFP1Q9HBX9 757 aa23.39■■□□□ 1.33
TSEN54-208ENST00000583173 LRRIQ3A6PVS8 624 aaPredicted RBP23.38■■□□□ 1.33
TSEN54-208ENST00000583173 M0QZQ0 153 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 C4BPAP04003 597 aaKnown RBP23.38■■□□□ 1.33
TSEN54-208ENST00000583173 DLATP10515 647 aaKnown RBP23.38■■□□□ 1.33
TSEN54-208ENST00000583173 PAX3P23760 479 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 PAK1Q13153 545 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 SMC1AQ14683 1233 aaKnown RBP23.38■■□□□ 1.33
TSEN54-208ENST00000583173 KLHL40Q2TBA0 621 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 DPCR1Q3MIW9 517 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 FAM171A1Q5VUB5 890 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 TRAPPC11Q7Z392 1133 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 FAM186BQ8IYM0 893 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 MICAL1Q8TDZ2 1067 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 B3GALT6Q96L58 329 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 FNBP1Q96RU3 617 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 MTMR12Q9C0I1 747 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 RWDD2AQ9UIY3 292 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 CTNND2Q9UQB3 1225 aa23.38■■□□□ 1.33
TSEN54-208ENST00000583173 BICDL2A1A5D9 508 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 I3L4J1 428 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 IKBKBO14920 756 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 TRAPPC3O43617 180 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 CST3P01034 146 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-208ENST00000583173 STX17P56962 302 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 HYAL1Q12794 435 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 MRPL58Q14197 206 aaKnown RBP23.37■■□□□ 1.33
TSEN54-208ENST00000583173 CT47A1Q5JQC4 288 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-208ENST00000583173 RTP2Q5QGT7 225 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 PLPP4Q5VZY2 271 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 CSGALNACT2Q8N6G5 542 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 LNX1Q8TBB1 728 aaPredicted RBP23.37■■□□□ 1.33
TSEN54-208ENST00000583173 CEP63Q96MT8 703 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 ENTPD7Q9NQZ7 604 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 ITGA11Q9UKX5 1188 aa23.37■■□□□ 1.33
TSEN54-208ENST00000583173 ATG2AQ2TAZ0 1938 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 TBC1D4O60343 1298 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 ITGB3P05106 788 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 TNNI1P19237 187 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 PTMSP20962 102 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 GLUD2P49448 558 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 VAMP7P51809 220 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 RBP5P82980 135 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 KCNC3Q14003 757 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.36■■□□□ 1.33
TSEN54-208ENST00000583173 C15orf39Q6ZRI6 1047 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 INTS8Q75QN2 995 aaKnown RBP23.36■■□□□ 1.33
TSEN54-208ENST00000583173 PIK3R5Q8WYR1 880 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 ANKRD36BP1Q96IX9 119 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 TTPALQ9BTX7 342 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 AGAP1Q9UPQ3 857 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 COL6A3P12111 3177 aa23.36■■□□□ 1.33
TSEN54-208ENST00000583173 SYN3O14994 580 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 SLC16A3O15427 465 aaKnown RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 CSPG5O95196 566 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 TMEM191BP0C7N4 346 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 ERCC5P28715 1186 aaPredicted RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 TKTP29401 623 aaKnown RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 POLR2BP30876 1174 aaKnown RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 GTF2F1P35269 517 aaKnown RBP eCLIP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 AP3M2P53677 418 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 BMS1Q14692 1282 aaKnown RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 CCDC85BQ15834 202 aaPredicted RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 DUSP6Q16828 381 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 CTC1Q2NKJ3 1217 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 LRRC52Q8N7C0 313 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 MAFAQ8NHW3 353 aaPredicted RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 KLHL5Q96PQ7 755 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 TLE6Q9H808 572 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 MRPL17Q9NRX2 175 aaKnown RBP23.35■■□□□ 1.33
TSEN54-208ENST00000583173 FNIP2Q9P278 1114 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 SSX2IPQ9Y2D8 614 aa23.35■■□□□ 1.33
TSEN54-208ENST00000583173 EYSQ5T1H1 3165 aa23.34■■□□□ 1.33
TSEN54-208ENST00000583173 CLASP2O75122 1294 aaKnown RBP23.34■■□□□ 1.33
TSEN54-208ENST00000583173 TNNC2P02585 160 aa23.34■■□□□ 1.33
TSEN54-208ENST00000583173 CNPP09543 421 aaKnown RBP23.34■■□□□ 1.33
TSEN54-208ENST00000583173 BFSP1Q12934 665 aa23.34■■□□□ 1.33
TSEN54-208ENST00000583173 CAVIN1Q6NZI2 390 aaKnown RBP23.34■■□□□ 1.33
TSEN54-208ENST00000583173 RIN2Q8WYP3 895 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-208ENST00000583173 SENP8Q96LD8 212 aa23.34■■□□□ 1.33
TSEN54-208ENST00000583173 PCDHB8Q9UN66 801 aa23.34■■□□□ 1.33
TSEN54-208ENST00000583173 NUB1Q9Y5A7 615 aa23.34■■□□□ 1.33
TSEN54-208ENST00000583173 SCN1AP35498 2009 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.33■■□□□ 1.33
TSEN54-208ENST00000583173 PER2O15055 1255 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 VNN1O95497 513 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 URODP06132 367 aa23.33■■□□□ 1.33
TSEN54-208ENST00000583173 EPB41P11171 864 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms