RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 TOP1MTQ969P6 601 aa12.92□□□□□ -0.34
CCDC57-216ENST00000582885 C18orf25Q96B23 403 aaPredicted RBP12.92□□□□□ -0.34
CCDC57-216ENST00000582885 DDX27Q96GQ7 796 aaKnown RBP12.92□□□□□ -0.34
CCDC57-216ENST00000582885 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
CCDC57-216ENST00000582885 UROC1Q96N76 676 aa12.92□□□□□ -0.34
CCDC57-216ENST00000582885 FAM124BQ9H5Z6 455 aaPredicted RBP12.92□□□□□ -0.34
CCDC57-216ENST00000582885 TUBGCP4Q9UGJ1 667 aa12.92□□□□□ -0.34
CCDC57-216ENST00000582885 PLAGL2Q9UPG8 496 aa12.92□□□□□ -0.34
CCDC57-216ENST00000582885 AGAP1Q9UPQ3 857 aa12.92□□□□□ -0.34
CCDC57-216ENST00000582885 TSC2P49815 1807 aa12.92□□□□□ -0.34
CCDC57-216ENST00000582885 AKR1B15C9JRZ8 316 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 RBAK-RBAKDNI3L0D1 243 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 MFAP3LO75121 409 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 LRRN2O75325 713 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 FGBP02675 491 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 KRT19P08727 400 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 TBXAS1P24557 533 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 POLR2BP30876 1174 aaKnown RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 CASP14P31944 242 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 AFF1P51825 1210 aaKnown RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 MFAP3P55082 362 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 POLR2FP61218 127 aaKnown RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 WDR5P61964 334 aaKnown RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 NOP14P78316 857 aaKnown RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 SOX4Q06945 474 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 DSC1Q08554 894 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 MYO1EQ12965 1108 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 ZNF699Q32M78 642 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 IQCEQ6IPM2 695 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 FMNL3Q8IVF7 1028 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 ABI1Q8IZP0 508 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 TC2NQ8N9U0 490 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 BAP1Q92560 729 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 SYN2Q92777 582 aaPredicted RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 DPF3Q92784 378 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 ZNF560Q96MR9 790 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 CASD1Q96PB1 797 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 PANX2Q96RD6 677 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 MRPL9Q9BYD2 267 aaKnown RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 STK33Q9BYT3 514 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 NR2E3Q9Y5X4 410 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 CEP290O15078 2479 aa12.91□□□□□ -0.34
CCDC57-216ENST00000582885 MKI67P46013 3256 aaKnown RBP12.91□□□□□ -0.34
CCDC57-216ENST00000582885 RNF225M0QZC1 329 aaPredicted RBP12.9□□□□□ -0.34
CCDC57-216ENST00000582885 DGKIO75912 1065 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 POMCP01189 267 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 ACRP10323 421 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 FGFR1P11362 822 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 P4HA1P13674 534 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 HNRNPH3P31942 346 aaKnown RBP12.9□□□□□ -0.34
CCDC57-216ENST00000582885 KRT9P35527 623 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 JAM2P57087 298 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 APBA1Q02410 837 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 ZNF667Q5HYK9 610 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 ZNF365Q70YC5 407 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 CCDC186Q7Z3E2 898 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 ARHGEF19Q8IW93 802 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 PPM1KQ8N3J5 372 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 OR8K1Q8NGG5 319 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 TATDN2Q93075 761 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 DNAJC7Q99615 494 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 LBHD1Q9BQE6 289 aaPredicted RBP12.9□□□□□ -0.34
CCDC57-216ENST00000582885 PI4K2AQ9BTU6 479 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 NIF3L1Q9GZT8 377 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 UBE2TQ9NPD8 197 aaPredicted RBP12.9□□□□□ -0.34
CCDC57-216ENST00000582885 TBC1D13Q9NVG8 400 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 INPP5FQ9Y2H2 1132 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 NUB1Q9Y5A7 615 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 FHOD1Q9Y613 1164 aa12.9□□□□□ -0.34
CCDC57-216ENST00000582885 VWA8A3KMH1 1905 aa12.9□□□□□ -0.35
CCDC57-216ENST00000582885 FAM163BP0C2L3 166 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 FECHP22830 423 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 KCNJ6P48051 423 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 CUL2Q13617 745 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 UPP1Q16831 310 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 SV2CQ496J9 727 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 TMEM240Q5SV17 173 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 SCARA3Q6AZY7 606 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 PDXDC1Q6P996 788 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 TTC39CQ8N584 583 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 HERVK_113Q902F9 699 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 SHC3Q92529 594 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 KREMEN1Q96MU8 473 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 SPAG5Q96R06 1193 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 BCO2Q9BYV7 579 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 CYP3A43Q9HB55 503 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 APOBEC3GQ9HC16 384 aaKnown RBP12.89□□□□□ -0.35
CCDC57-216ENST00000582885 NLRC4Q9NPP4 1024 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 ABHD10Q9NUJ1 306 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 GDAP2Q9NXN4 497 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 AIPL1Q9NZN9 384 aa12.89□□□□□ -0.35
CCDC57-216ENST00000582885 CNTN6Q9UQ52 1028 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms