RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 ITGA11Q9UKX5 1188 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 AGAP1Q9UPQ3 857 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 SIK3Q9Y2K2 1263 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 VWA8A3KMH1 1905 aa10.28□□□□□ -0.76
RFFL-210ENST00000582308 GRXCR1A8MXD5 290 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 CBFA2T2O43439 604 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 KRT19P08727 400 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 RPL9P32969 192 aaKnown RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 BMP8BP34820 402 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 PIK3CAP42336 1068 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 KLK7P49862 253 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 MRE11P49959 708 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 CLCNKBP51801 687 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 RABGGTBP53611 331 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 APBA1Q02410 837 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 MLLT1Q03111 559 aaPredicted RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 TRPC3Q13507 836 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 BTG3Q14201 252 aaPredicted RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 UPP1Q16831 310 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 EXOC3L4Q17RC7 722 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 FAM109BQ6ICB4 259 aaPredicted RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 CD300LGQ6UXG3 332 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 LRRC43Q8N309 656 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 TATDN2Q93075 761 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 DDX27Q96GQ7 796 aaKnown RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 FAM193BQ96PV7 902 aaPredicted RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 RAD9AQ99638 391 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 ZBED2Q9BTP6 218 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 MRPL9Q9BYD2 267 aaKnown RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 INTS2Q9H0H0 1204 aaKnown RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 SIX2Q9NPC8 291 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 RAB20Q9NX57 234 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 GCNT4Q9P109 453 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 INSL6Q9Y581 213 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 MRPL42Q9Y6G3 142 aaKnown RBP10.27□□□□□ -0.77
RFFL-210ENST00000582308 CHD9Q3L8U1 2897 aa10.27□□□□□ -0.77
RFFL-210ENST00000582308 PLXNA4Q9HCM2 1894 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 A0A1W2PQC6 194 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 LCHNA4D1U4 455 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 F8W810 466 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 PODXLO00592 558 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 SPTLC1O15269 473 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 TLL1O43897 1013 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 ZC3H11AO75152 810 aaKnown RBP eCLIP10.26□□□□□ -0.77
RFFL-210ENST00000582308 NOL4O94818 638 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 ADCY5O95622 1261 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 ASS1P00966 412 aaKnown RBP10.26□□□□□ -0.77
RFFL-210ENST00000582308 GALTP07902 379 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 SLC11A1P49279 550 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 BCAR1P56945 870 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 CETN1Q12798 172 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 SGSM1Q2NKQ1 1148 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 SPOPLQ6IQ16 392 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 TRIM65Q6PJ69 517 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 LRRC52Q8N7C0 313 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 C3orf58Q8NDZ4 430 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
RFFL-210ENST00000582308 HPDLQ96IR7 371 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 UROC1Q96N76 676 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 LSM14BQ9BX40 385 aaKnown RBP10.26□□□□□ -0.77
RFFL-210ENST00000582308 PRO3102Q9H379 93 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 APOBEC3GQ9HC16 384 aaKnown RBP10.26□□□□□ -0.77
RFFL-210ENST00000582308 NUB1Q9Y5A7 615 aa10.26□□□□□ -0.77
RFFL-210ENST00000582308 MYO7AQ13402 2215 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 CHD7Q9P2D1 2997 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 NRP1O14786 923 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 EPHB6O15197 1021 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 B3GAT3O94766 335 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 KIF4AO95239 1232 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
RFFL-210ENST00000582308 ALDH2P05091 517 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 ITGB1P05556 798 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 TPM3P06753 285 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 LINC00271P0C7V0 271 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 MYOGP15173 224 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 ATICP31939 592 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 PBX3P40426 434 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 OR1G1P47890 313 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 LILRA4P59901 499 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 NOP14P78316 857 aaKnown RBP10.25□□□□□ -0.77
RFFL-210ENST00000582308 LRMPQ12912 555 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 ZNF699Q32M78 642 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 KLHDC7AQ5VTJ3 777 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 PHLDB3Q6NSJ2 640 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 GJB7Q6PEY0 223 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 DCLRE1AQ6PJP8 1040 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 VSTM4Q8IW00 320 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 ARHGEF19Q8IW93 802 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 FIBCD1Q8N539 461 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 TAF4BQ92750 862 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 MRFAP1L1Q96HT8 127 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 TMEM175Q9BSA9 504 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 GANQ9H2C0 597 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 VRTNQ9H8Y1 702 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 PLCB1Q9NQ66 1216 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 FAM207AQ9NSI2 230 aaPredicted RBP10.25□□□□□ -0.77
RFFL-210ENST00000582308 AJAP1Q9UKB5 411 aaPredicted RBP10.25□□□□□ -0.77
RFFL-210ENST00000582308 POLIQ9UNA4 740 aa10.25□□□□□ -0.77
RFFL-210ENST00000582308 FAN1Q9Y2M0 1017 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms