RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 FAM200AQ8TCP9 573 aa9.63□□□□□ -0.87
NUP85-217ENST00000581335 GPR152Q8TDT2 470 aa9.63□□□□□ -0.87
NUP85-217ENST00000581335 ZSCAN31Q96LW9 406 aaPredicted RBP9.63□□□□□ -0.87
NUP85-217ENST00000581335 PPP1R10Q96QC0 940 aaKnown RBP9.63□□□□□ -0.87
NUP85-217ENST00000581335 KIFC3Q9BVG8 833 aa9.63□□□□□ -0.87
NUP85-217ENST00000581335 DDX19AQ9NUU7 478 aaKnown RBP9.63□□□□□ -0.87
NUP85-217ENST00000581335 CA14Q9ULX7 337 aa9.63□□□□□ -0.87
NUP85-217ENST00000581335 NOL7Q9UMY1 257 aaKnown RBP9.63□□□□□ -0.87
NUP85-217ENST00000581335 NUMBLQ9Y6R0 609 aa9.63□□□□□ -0.87
NUP85-217ENST00000581335 CCL16O15467 120 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 TRAPPC3O43617 180 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 XYLBO75191 536 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 B3GAT3O94766 335 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 POU2F2P09086 479 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 FGFR3P22607 806 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 IGFBP6P24592 240 aaPredicted RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
NUP85-217ENST00000581335 OR1D2P34982 312 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 TOB1P50616 345 aaPredicted RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 PEX3P56589 373 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 NTHL1P78549 312 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 DPYDQ12882 1025 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 UPP1Q16831 310 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 AXDND1Q5T1B0 1012 aaPredicted RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 PARM1Q6UWI2 310 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 CD300LGQ6UXG3 332 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 RTL10Q7L3V2 364 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 IGSF22Q8N9C0 903 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 ST13P5Q8NFI4 369 aaPredicted RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 NKD2Q969F2 451 aaPredicted RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 UROC1Q96N76 676 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 ACO2Q99798 780 aaKnown RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 RPP25Q9BUL9 199 aaKnown RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 RAB34Q9BZG1 259 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 TBC1D17Q9HA65 648 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 SLC2A4RGQ9NR83 387 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
NUP85-217ENST00000581335 MTRRQ9UBK8 725 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 CDH7Q9ULB5 785 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 POLIQ9UNA4 740 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 DNM3Q9UQ16 869 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 TNFSF13BQ9Y275 285 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 SIT1Q9Y3P8 196 aa9.62□□□□□ -0.87
NUP85-217ENST00000581335 NOTCH4Q99466 2003 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 DMDP11532 3685 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 SMIM28A0A1B0GU29 152 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 CCDC169A6NNP5 214 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 E9PMD0 336 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 GRM5P41594 1212 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 NPTX2P47972 431 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 YARSP54577 528 aaKnown RBP9.61□□□□□ -0.87
NUP85-217ENST00000581335 STARD6P59095 220 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 GPC5P78333 572 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 EML3Q32P44 896 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 XKR4Q5GH76 650 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 GLRA4Q5JXX5 417 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 ALKAL1Q6UXT8 129 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 RSPO2Q6UXX9 243 aaPredicted RBP9.61□□□□□ -0.87
NUP85-217ENST00000581335 MTSS1LQ765P7 747 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 ITFG1Q8TB96 612 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 SLC7A14Q8TBB6 771 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 SNX29Q8TEQ0 813 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 FGF13Q92913 245 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 FGF14Q92915 247 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 CCDC94Q9BW85 323 aaPredicted RBP9.61□□□□□ -0.87
NUP85-217ENST00000581335 PTPRHQ9HD43 1115 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 ARHGEF3Q9NR81 526 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 TOPORSQ9NS56 1045 aaPredicted RBP9.61□□□□□ -0.87
NUP85-217ENST00000581335 DNMT3BQ9UBC3 853 aaKnown RBP9.61□□□□□ -0.87
NUP85-217ENST00000581335 PCDHB6Q9Y5E3 794 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 BACE2Q9Y5Z0 518 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 CDY1Q9Y6F8 540 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 MYH11P35749 1972 aa9.61□□□□□ -0.87
NUP85-217ENST00000581335 PHLPP2Q6ZVD8 1323 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 CITO14578 2027 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 LAD1O00515 517 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 HIP1RO75146 1068 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 DCNP07585 359 aaKnown RBP9.6□□□□□ -0.87
NUP85-217ENST00000581335 TKTP29401 623 aaKnown RBP9.6□□□□□ -0.87
NUP85-217ENST00000581335 PRPHP41219 470 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 BRCC3P46736 316 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 OSTNP61366 133 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 SOX4Q06945 474 aaPredicted RBP9.6□□□□□ -0.87
NUP85-217ENST00000581335 DMP1Q13316 513 aaPredicted RBP9.6□□□□□ -0.87
NUP85-217ENST00000581335 IL17AQ16552 155 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 SWI5Q1ZZU3 235 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 C4orf48Q5BLP8 95 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 SPECC1Q5M775 1068 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 KRT79Q5XKE5 535 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 RINT1Q6NUQ1 792 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 DTHD1Q6ZMT9 781 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 ANKS3Q6ZW76 656 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 C1orf186Q6ZWK4 172 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 TAS1R3Q7RTX0 852 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 DAW1Q8N136 415 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 ADSSL1Q8N142 457 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 CEP120Q8N960 986 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 C3orf58Q8NDZ4 430 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 SHDQ96IW2 340 aa9.6□□□□□ -0.87
NUP85-217ENST00000581335 DRC1Q96MC2 740 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms