RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 PPP2R3CQ969Q6 453 aa14.11□□□□□ -0.15
CDC42EP4-207ENST00000581045 TSPAN18Q96SJ8 248 aa14.11□□□□□ -0.15
CDC42EP4-207ENST00000581045 CGRRF1Q99675 332 aa14.11□□□□□ -0.15
CDC42EP4-207ENST00000581045 MMRN2Q9H8L6 949 aa14.11□□□□□ -0.15
CDC42EP4-207ENST00000581045 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
CDC42EP4-207ENST00000581045 PRDM6Q9NQX0 595 aa14.11□□□□□ -0.15
CDC42EP4-207ENST00000581045 MRPL17Q9NRX2 175 aaKnown RBP14.11□□□□□ -0.15
CDC42EP4-207ENST00000581045 C2orf71A6NGG8 1288 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 LINC01565O15544 149 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 TRAPPC3O43617 180 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 AKAP3O75969 853 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 RPL17P18621 184 aaKnown RBP14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 CCNE1P24864 410 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 PPP1R2P41236 205 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 DLG4P78352 724 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 RBM10P98175 930 aaKnown RBP14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 PAK1Q13153 545 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 EDRF1Q3B7T1 1238 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 RTP2Q5QGT7 225 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 PDE12Q6L8Q7 609 aaKnown RBP14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 DSTYKQ6XUX3 929 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 NT5DC4Q86YG4 428 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 WDR49Q8IV35 697 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 CSGALNACT2Q8N6G5 542 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 MRPL43Q8N983 215 aaKnown RBP14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 C1orf127Q8N9H9 656 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 PLEKHO2Q8TD55 490 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 DHTKD1Q96HY7 919 aaPredicted RBP14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 MFSD14AQ96MC6 490 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 INTS13Q9NVM9 706 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 CLDND1Q9NY35 253 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 AGAP1Q9UPQ3 857 aa14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 R3HCC1Q9Y3T6 440 aaKnown RBP14.1□□□□□ -0.15
CDC42EP4-207ENST00000581045 LRRIQ3A6PVS8 624 aaPredicted RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 CETN3O15182 167 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 EPB41P11171 864 aaKnown RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 KRT13P13646 458 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 PSMC2P35998 433 aaKnown RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 LRRC63Q05C16 580 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 ELAVL2Q12926 359 aaKnown RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 BFSP1Q12934 665 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 MYBPC2Q14324 1141 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 NFIL3Q16649 462 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 DUOXA2Q1HG44 320 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 DPCR1Q3MIW9 517 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 CCDC183Q5T5S1 534 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 CAVIN1Q6NZI2 390 aaKnown RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 RNF168Q8IYW5 571 aaPredicted RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 TTPALQ9BTX7 342 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 EMILIN2Q9BXX0 1053 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 STK39Q9UEW8 545 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 ITGA11Q9UKX5 1188 aa14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 TIMM13Q9Y5L4 95 aaPredicted RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.09□□□□□ -0.15
CDC42EP4-207ENST00000581045 ANO9A1A5B4 782 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 BICDL2A1A5D9 508 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 PIRO00625 290 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 SPTLC1O15269 473 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 PHACTR2O75167 634 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 EFEMP2O95967 443 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 CNPP09543 421 aaKnown RBP14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 TRIM49P0CI25 452 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 TRIM49CP0CI26 452 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 KLRC2P26717 231 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 TAF6P49848 677 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 VAMP7P51809 220 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 NLRP12P59046 1061 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 LILRA4P59901 499 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 DSG1Q02413 1049 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 BIRC3Q13489 604 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 PSMD5Q16401 504 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 DUSP6Q16828 381 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 KIAA0319Q5VV43 1072 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 PARD3BQ8TEW8 1205 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 ZNF516Q92618 1163 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 SUSD3Q96L08 255 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 ZNF560Q96MR9 790 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 KLHL5Q96PQ7 755 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 DUSP9Q99956 384 aaKnown RBP14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 GZF1Q9H116 711 aaPredicted RBP14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 CHST7Q9NS84 486 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 TMEM63CQ9P1W3 806 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 SIX4Q9UIU6 781 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 SSX2IPQ9Y2D8 614 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 COL6A3P12111 3177 aa14.08□□□□□ -0.16
CDC42EP4-207ENST00000581045 TEX28O15482 410 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 CLASP2O75122 1294 aaKnown RBP14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 FGFR3P22607 806 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 NDUFV1P49821 464 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 RBP5P82980 135 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 FKBP3Q00688 224 aaKnown RBP14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 CLUL1Q15846 466 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 SV2CQ496J9 727 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 DCAF17Q5H9S7 520 aaPredicted RBP14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 VARS2Q5ST30 1063 aaKnown RBP14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 TCERG1LQ5VWI1 586 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 TTI2Q6NXR4 508 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 SASS6Q6UVJ0 657 aa14.07□□□□□ -0.16
CDC42EP4-207ENST00000581045 INTS8Q75QN2 995 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms