RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 SNX29Q8TEQ0 813 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 SMARCD2Q92925 531 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 SUSD3Q96L08 255 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 ZMAT2Q96NC0 199 aaKnown RBP11.25□□□□□ -0.61
GGA3-210ENST00000580799 ASB16Q96NS5 453 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 TIPINQ9BVW5 301 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 TARS2Q9BW92 718 aaKnown RBP11.25□□□□□ -0.61
GGA3-210ENST00000580799 PLA2G2FQ9BZM2 168 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 BRD9Q9H8M2 597 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 POLD4Q9HCU8 107 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 FBXL5Q9UKA1 691 aa11.25□□□□□ -0.61
GGA3-210ENST00000580799 SMG5Q9UPR3 1016 aaKnown RBP11.25□□□□□ -0.61
GGA3-210ENST00000580799 PDCD11Q14690 1871 aaKnown RBP11.25□□□□□ -0.61
GGA3-210ENST00000580799 PRR5-ARHGAP8B1AHC4 643 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 ABLIM1O14639 778 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 HIP1RO75146 1068 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 TOM1L1O75674 476 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 SEC24AO95486 1093 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 PSMC3P17980 439 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 EPHA5P54756 1037 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 MLLT6P55198 1093 aaPredicted RBP11.24□□□□□ -0.61
GGA3-210ENST00000580799 ARHGAP8P85298 464 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 LMNB2Q03252 620 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 STRN3Q13033 797 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 MTAPQ13126 283 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 RSPO4Q2I0M5 234 aaPredicted RBP11.24□□□□□ -0.61
GGA3-210ENST00000580799 KRT79Q5XKE5 535 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 TAS1R3Q7RTX0 852 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 CCDC83Q8IWF9 413 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 DEPDC1BQ8WUY9 529 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 E2F7Q96AV8 911 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 ZNF512Q96ME7 567 aaPredicted RBP11.24□□□□□ -0.61
GGA3-210ENST00000580799 NTPCRQ9BSD7 190 aaKnown RBP11.24□□□□□ -0.61
GGA3-210ENST00000580799 OXCT2Q9BYC2 517 aaPredicted RBP11.24□□□□□ -0.61
GGA3-210ENST00000580799 GPR88Q9GZN0 384 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 CHRDQ9H2X0 955 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 TRPV4Q9HBA0 871 aa11.24□□□□□ -0.61
GGA3-210ENST00000580799 AFF4Q9UHB7 1163 aaKnown RBP11.24□□□□□ -0.61
GGA3-210ENST00000580799 TICRRQ7Z2Z1 1910 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 CEP250Q9BV73 2442 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 SHISA7A6NL88 538 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 E9PMD0 336 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 CPB1P15086 417 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 GUCY2CP25092 1073 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 U2AF2P26368 475 aaKnown RBP eCLIP11.23□□□□□ -0.613e-7■■□□□ 12.8
GGA3-210ENST00000580799 MCM4P33991 863 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 PRPHP41219 470 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 CCR2P41597 374 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 SMTNP53814 917 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 MAPK7Q13164 816 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 PTGDRQ13258 359 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 GRM2Q14416 872 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 C1orf228Q6PIY5 440 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 POTEHQ6S545 545 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 ZPBP2Q6X784 338 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 FAM184AQ8NB25 1140 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 C18orf25Q96B23 403 aaPredicted RBP11.23□□□□□ -0.61
GGA3-210ENST00000580799 TCEAL4Q96EI5 215 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 TBC1D32Q96NH3 1257 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 ZNF334Q9HCZ1 680 aaPredicted RBP11.23□□□□□ -0.61
GGA3-210ENST00000580799 ASAH2Q9NR71 780 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 NDRG2Q9UN36 371 aaKnown RBP11.23□□□□□ -0.61
GGA3-210ENST00000580799 PCDHB8Q9UN66 801 aa11.23□□□□□ -0.61
GGA3-210ENST00000580799 DNAH14Q0VDD8 3507 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 ZNF263O14978 683 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 SLC16A4O15374 487 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 CLDN3O15551 220 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 OAZ2O95190 189 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 NEFLP07196 543 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 MARCKSP29966 332 aaPredicted RBP11.22□□□□□ -0.61
GGA3-210ENST00000580799 GDI1P31150 447 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 CCR3P51677 355 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 YWHAHQ04917 246 aaPredicted RBP11.22□□□□□ -0.61
GGA3-210ENST00000580799 PLD1Q13393 1074 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 NBR1Q14596 966 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 NOLC1Q14978 699 aaKnown RBP eCLIP11.22□□□□□ -0.61
GGA3-210ENST00000580799 RINT1Q6NUQ1 792 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 TSSK4Q6SA08 328 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 VITQ6UXI7 678 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 C1orf186Q6ZWK4 172 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 MFSD6LQ8IWD5 586 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 BEST2Q8NFU1 509 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 ZSCAN18Q8TBC5 510 aaPredicted RBP11.22□□□□□ -0.61
GGA3-210ENST00000580799 DDX12PQ92771 950 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 MSANTD3Q96H12 275 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 ZSCAN31Q96LW9 406 aaPredicted RBP11.22□□□□□ -0.61
GGA3-210ENST00000580799 RUSC1Q9BVN2 902 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 PLEKHA5Q9HAU0 1116 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 KCND2Q9NZV8 630 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 CEP72Q9P209 647 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 ANKFY1Q9P2R3 1169 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 GMEB2Q9UKD1 530 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 CDV3Q9UKY7 258 aaKnown RBP11.22□□□□□ -0.61
GGA3-210ENST00000580799 RAB23Q9ULC3 237 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 PIAS3Q9Y6X2 628 aa11.22□□□□□ -0.61
GGA3-210ENST00000580799 H0YCG3 227 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms