RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TMEM189-UBE2V1I3L0A0 370 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 PODXLO00592 558 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 PIRO00625 290 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 DDHD2O94830 711 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 STAU1O95793 577 aaKnown RBP15.38■□□□□ 0.05
SKA2-205ENST00000580541 GALTP07902 379 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 POLR2BP30876 1174 aaKnown RBP15.38■□□□□ 0.05
SKA2-205ENST00000580541 TAF6P49848 677 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 WNT7BP56706 349 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 BCAR1P56945 870 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 BMS1Q14692 1282 aaKnown RBP15.38■□□□□ 0.05
SKA2-205ENST00000580541 NAB2Q15742 525 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 EXOC3L4Q17RC7 722 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 MIIPQ5JXC2 388 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 TDRD10Q5VZ19 366 aaKnown RBP15.38■□□□□ 0.05
SKA2-205ENST00000580541 TMCO2Q7Z6W1 182 aaPredicted RBP15.38■□□□□ 0.05
SKA2-205ENST00000580541 ZNF280BQ86YH2 543 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 EHBP1Q8NDI1 1231 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 CLP1Q92989 425 aaKnown RBP15.38■□□□□ 0.05
SKA2-205ENST00000580541 HPDLQ96IR7 371 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 PLVAPQ9BX97 442 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 DNAI2Q9GZS0 605 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 SPG21Q9NZD8 308 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 TUBGCP4Q9UGJ1 667 aa15.38■□□□□ 0.05
SKA2-205ENST00000580541 PDCD11Q14690 1871 aaKnown RBP15.37■□□□□ 0.05
SKA2-205ENST00000580541 NRP1O14786 923 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 HLA-DRAP01903 254 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 RB1P06400 928 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 CLCNKBP51801 687 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 SMAD3P84022 425 aaKnown RBP15.37■□□□□ 0.05
SKA2-205ENST00000580541 CBWD6Q4V339 395 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 CBWD3Q5JTY5 395 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 CBWD5Q5RIA9 395 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 PRPF38BQ5VTL8 546 aaKnown RBP15.37■□□□□ 0.05
SKA2-205ENST00000580541 KCNT2Q6UVM3 1135 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 PCMTD1Q96MG8 357 aaPredicted RBP15.37■□□□□ 0.05
SKA2-205ENST00000580541 TRIM5Q9C035 493 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 CXCL16Q9H2A7 254 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 CWH43Q9H720 699 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 RTN4Q9NQC3 1192 aaKnown RBP15.37■□□□□ 0.05
SKA2-205ENST00000580541 PUF60Q9UHX1 559 aaKnown RBP15.37■□□□□ 0.05
SKA2-205ENST00000580541 DAAM1Q9Y4D1 1078 aa15.37■□□□□ 0.05
SKA2-205ENST00000580541 MRPL42Q9Y6G3 142 aaKnown RBP15.37■□□□□ 0.05
SKA2-205ENST00000580541 A0A1B0GTH6 734 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 KPNA7A9QM74 516 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 CST3P01034 146 aaPredicted RBP15.36■□□□□ 0.05
SKA2-205ENST00000580541 FAM163BP0C2L3 166 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 RABGGTBP53611 331 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 LILRA4P59901 499 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 TNNC1P63316 161 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 SOX4Q06945 474 aaPredicted RBP15.36■□□□□ 0.05
SKA2-205ENST00000580541 NR1I3Q14994 352 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 ZNF699Q32M78 642 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 ZNF667Q5HYK9 610 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 SMYD5Q6GMV2 418 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 SARM1Q6SZW1 724 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 DSTYKQ6XUX3 929 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 DPH6Q7L8W6 267 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 TTC39CQ8N584 583 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 COLGALT1Q8NBJ5 622 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 TAS1R2Q8TE23 839 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 TMEM169Q96HH4 297 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 PRO3102Q9H379 93 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 FAM124BQ9H5Z6 455 aaPredicted RBP15.36■□□□□ 0.05
SKA2-205ENST00000580541 VRTNQ9H8Y1 702 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 SLC28A3Q9HAS3 691 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 GOLGA2P5Q9HBQ8 144 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 GCNT4Q9P109 453 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 DNAJB4Q9UDY4 337 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 DSEQ9UL01 958 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 PTPRJQ12913 1337 aa15.36■□□□□ 0.05
SKA2-205ENST00000580541 A0A1W2PQC6 194 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 HUS1O60921 280 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 ASS1P00966 412 aaKnown RBP15.35■□□□□ 0.05
SKA2-205ENST00000580541 TRIM21P19474 475 aaKnown RBP15.35■□□□□ 0.05
SKA2-205ENST00000580541 TBXAS1P24557 533 aaPredicted RBP15.35■□□□□ 0.05
SKA2-205ENST00000580541 BMPR1AP36894 532 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 SLC11A1P49279 550 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 MYL6P60660 151 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 WDR72Q3MJ13 1102 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 LRIT3Q3SXY7 679 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 ENOSF1Q7L5Y1 443 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 APTXQ7Z2E3 356 aaKnown RBP15.35■□□□□ 0.05
SKA2-205ENST00000580541 METTL23Q86XA0 190 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 APPL2Q8NEU8 664 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 ANP32BQ92688 251 aaKnown RBP15.35■□□□□ 0.05
SKA2-205ENST00000580541 IQCDQ96DY2 449 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 NT5C1BQ96P26 610 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 ERGIC2Q96RQ1 377 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 TGS1Q96RS0 853 aaKnown RBP15.35■□□□□ 0.05
SKA2-205ENST00000580541 GDAP2Q9NXN4 497 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 IFNKQ9P0W0 207 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 SIX4Q9UIU6 781 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 ADAM28Q9UKQ2 775 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 SSX2IPQ9Y2D8 614 aa15.35■□□□□ 0.05
SKA2-205ENST00000580541 PRG3Q9Y2Y8 225 aaPredicted RBP15.35■□□□□ 0.05
SKA2-205ENST00000580541 SF3B1O75533 1304 aaKnown RBP eCLIP15.35■□□□□ 0.057e-6■■■■■ 33.4
SKA2-205ENST00000580541 LINC01553A4QN01 128 aa15.34■□□□□ 0.05
SKA2-205ENST00000580541 GRXCR1A8MXD5 290 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms