RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 POU5F1BQ06416 359 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 HYAL2Q12891 473 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 BNIP3Q12983 259 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 GIT2Q14161 759 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 MCM6Q14566 821 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 DSC3Q14574 896 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 LONRF3Q496Y0 759 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 XKR9Q5GH70 373 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 KRT79Q5XKE5 535 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 MFSD5Q6N075 450 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 EFCAB12Q6NXP0 572 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 TAF2Q6P1X5 1199 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF765Q7L2R6 523 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 RTN4RL1Q86UN2 441 aaPredicted RBP4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 FAM228AQ86W67 206 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 SPATA20Q8TB22 786 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 LARP4BQ92615 738 aaKnown RBP4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 BADQ92934 168 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 TMEM143Q96AN5 459 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 CEP170P1Q96L14 293 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 SPATA32Q96LK8 384 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 PLIN2Q99541 437 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.2□□□□□ -1.745e-7■■■□□ 18.9
SMARCE1-215ENST00000578995 REEP2Q9BRK0 252 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 NTPCRQ9BSD7 190 aaKnown RBP4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 HTATIP2Q9BUP3 242 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 NFKBIZQ9BYH8 718 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 CELF4Q9BZC1 486 aaKnown RBP4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 RAB34Q9BZG1 259 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 PPP1R12CQ9BZL4 782 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 SCAND2PQ9GZW5 306 aaPredicted RBP4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 NT5C3AQ9H0P0 336 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 HIPK3Q9H422 1215 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 POLD4Q9HCU8 107 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 NRBP2Q9NSY0 501 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 LMBRD1Q9NUN5 540 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 TMEM39AQ9NV64 488 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 ARHGAP28Q9P2N2 729 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 CFAP45Q9UL16 551 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 ZMYND8Q9ULU4 1186 aaPredicted RBP4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 TRPV2Q9Y5S1 764 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 CDY2AQ9Y6F7 541 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 SQORQ9Y6N5 450 aa4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF638Q14966 1978 aaKnown RBP4.2□□□□□ -1.74
SMARCE1-215ENST00000578995 DOCK6Q96HP0 2047 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 A0A087WZ62 844 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TLR3O15455 904 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 FAM189A1O60320 539 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 MARCH6O60337 910 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TSPAN1O60635 241 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 HIP1RO75146 1068 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 CTSHP09668 335 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 GNAT1P11488 350 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 DARSP14868 501 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ATF7P17544 494 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 PROZP22891 400 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 HOXA11P31270 313 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 THPOP40225 353 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 UBA7P41226 1012 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ME1P48163 572 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ARL4DP49703 201 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 CASP5P51878 434 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 CRYBB1P53674 252 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 NCKAP1LP55160 1127 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 CCL23P55773 120 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 NLRP11P59045 1033 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 PTENP60484 403 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 MBTD1Q05BQ5 628 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TMEM62Q0P6H9 643 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 LAMTOR4Q0VGL1 99 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 FAM187BQ17R55 369 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 KIZQ2M2Z5 673 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TMEM240Q5SV17 173 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 C9orf50Q5SZB4 431 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 UBXN11Q5T124 520 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 SLC39A4Q6P5W5 647 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TSHZ1Q6ZSZ6 1077 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 EPM2AIP1Q7L775 607 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 OTUD6AQ7L8S5 288 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TRMT1LQ7Z2T5 733 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF410Q86VK4 478 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 CKAP2LQ8IYA6 745 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 GRAMD1CQ8IYS0 662 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 DEPDC4Q8N2C3 294 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 NME8Q8N427 588 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TMEM161BQ8NDZ6 487 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 MCPH1Q8NEM0 835 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ERMNQ8TAM6 284 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 PRPF31Q8WWY3 499 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 MRPS27Q92552 414 aaKnown RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 STAMQ92783 540 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 ZNF668Q96K58 619 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 OSMRQ99650 979 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 FDXACB1Q9BRP7 624 aaPredicted RBP4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 KIFC3Q9BVG8 833 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TRAIPQ9BWF2 469 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TMPRSS13Q9BYE2 586 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 TRIM9Q9C026 710 aa4.19□□□□□ -1.74
SMARCE1-215ENST00000578995 HAPLN2Q9GZV7 340 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms