RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 MCM4P33991 863 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 ACOT2P49753 483 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 KCNA1Q09470 495 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 PPM1LQ5SGD2 360 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 SPATA1Q5VX52 437 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 TMEM130Q8N3G9 435 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 IQUBQ8NA54 791 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 ZNF461Q8TAF7 563 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 PBXIP1Q96AQ6 731 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 ASIC4Q96FT7 647 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 ASB7Q9H672 318 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 CFAP45Q9UL16 551 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 DERAQ9Y315 318 aa24.96■■□□□ 1.59
VAPA-205ENST00000578314 VWA8A3KMH1 1905 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 H7C4K7 107 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 M0QZQ0 153 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 ABLIM3O94929 683 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 GCNT3O95395 438 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 ASGR2P07307 311 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 POU2F2P09086 479 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 AARSP49588 968 aaKnown RBP eCLIP24.95■■□□□ 1.581e-7■■□□□ 14.2
VAPA-205ENST00000578314 CASP5P51878 434 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 MTMR3Q13615 1198 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 ALCAMQ13740 583 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 CCDC65Q8IXS2 484 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 APPL2Q8NEU8 664 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 RCOR1Q9UKL0 485 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 PCDHB8Q9UN66 801 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 PCDHA7Q9UN72 937 aa24.95■■□□□ 1.58
VAPA-205ENST00000578314 AMPD3Q01432 767 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 JADE1Q6IE81 842 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 CNNM4Q6P4Q7 775 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 CRELD2Q6UXH1 353 aaPredicted RBP24.94■■□□□ 1.58
VAPA-205ENST00000578314 SLC7A14Q8TBB6 771 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 POMGNT1Q8WZA1 660 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 DHX58Q96C10 678 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 FAM212AQ96EL1 285 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.94■■□□□ 1.58
VAPA-205ENST00000578314 EPS15L1Q9UBC2 864 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 FBXL5Q9UKA1 691 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 CITO14578 2027 aa24.94■■□□□ 1.58
VAPA-205ENST00000578314 GUCY2FP51841 1108 aa24.93■■□□□ 1.58
VAPA-205ENST00000578314 ROR1Q01973 937 aa24.93■■□□□ 1.58
VAPA-205ENST00000578314 DNM1Q05193 864 aaKnown RBP24.93■■□□□ 1.58
VAPA-205ENST00000578314 BEST2Q8NFU1 509 aa24.93■■□□□ 1.58
VAPA-205ENST00000578314 FGFBP2Q9BYJ0 223 aa24.93■■□□□ 1.58
VAPA-205ENST00000578314 TRIM9Q9C026 710 aa24.93■■□□□ 1.58
VAPA-205ENST00000578314 C2CD2Q9Y426 696 aa24.93■■□□□ 1.58
VAPA-205ENST00000578314 DENND4AQ7Z401 1863 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 XYLBO75191 536 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 OAZ2O95190 189 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 PAX3P23760 479 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 GBP2P32456 591 aaPredicted RBP24.92■■□□□ 1.58
VAPA-205ENST00000578314 ME1P48163 572 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 CTXN3Q4LDR2 81 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 MYADMQ96S97 322 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 TMEM206Q9H813 350 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 KCNK12Q9HB15 430 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 IGSF9Q9P2J2 1179 aa24.92■■□□□ 1.58
VAPA-205ENST00000578314 MTCL1Q9Y4B5 1905 aaKnown RBP24.92■■□□□ 1.58
VAPA-205ENST00000578314 WDR27A2RRH5 827 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 NFICP08651 508 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 ATF2P15336 505 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 GARTP22102 1010 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 TMEM132DQ14C87 1099 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 C9orf57Q5W0N0 161 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 RESP18Q5W5W9 173 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 ZNF280DQ6N043 979 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 GRASPQ7Z6J2 395 aaPredicted RBP24.91■■□□□ 1.58
VAPA-205ENST00000578314 SUGP1Q8IWZ8 645 aaKnown RBP24.91■■□□□ 1.58
VAPA-205ENST00000578314 FBXL6Q8N531 539 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 C7orf25Q9BPX7 421 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 MAGEF1Q9HAY2 307 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 FAM13BQ9NYF5 915 aa24.91■■□□□ 1.58
VAPA-205ENST00000578314 ANO9A1A5B4 782 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 PIRO00625 290 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 CCL16O15467 120 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 POLR2DO15514 142 aaKnown RBP24.9■■□□□ 1.58
VAPA-205ENST00000578314 LILRA4P59901 499 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 TDGQ13569 410 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 TPGS2Q68CL5 300 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 TCEAL8Q8IYN2 117 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 SYCP3Q8IZU3 236 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 OXCT2Q9BYC2 517 aaPredicted RBP24.9■■□□□ 1.58
VAPA-205ENST00000578314 MAFFQ9ULX9 164 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 ZDHHC9Q9Y397 364 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 C2orf16Q68DN1 1984 aa24.9■■□□□ 1.58
VAPA-205ENST00000578314 ARHGEF37A1IGU5 675 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 PPEF2O14830 753 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 PRPF6O94906 941 aaKnown RBP24.89■■□□□ 1.58
VAPA-205ENST00000578314 IL18RAPO95256 599 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 LDHAP00338 332 aaKnown RBP24.89■■□□□ 1.58
VAPA-205ENST00000578314 LAMP2P13473 410 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 FSHRP23945 695 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 NHLH1Q02575 133 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 DSTYKQ6XUX3 929 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 NXPE3Q969Y0 559 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 FAM213AQ9BRX8 229 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 SMOC2Q9H3U7 446 aa24.89■■□□□ 1.58
VAPA-205ENST00000578314 ZFP37Q9Y6Q3 630 aaPredicted RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms