RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 ANO6Q4KMQ2 910 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 CCDC93Q567U6 631 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 UTP14CQ5TAP6 766 aaKnown RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 CCDC181Q5TID7 509 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 TSHZ3Q63HK5 1081 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 METRNLQ641Q3 311 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 CHST15Q7LFX5 561 aaPredicted RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 OVCH2Q7RTZ1 564 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 SRGAP1Q7Z6B7 1085 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 PDSS2Q86YH6 399 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 ZFPM1Q8IX07 1006 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 SH2D3CQ8N5H7 860 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 OR56A1Q8NGH5 318 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 TBC1D15Q8TC07 691 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 BRIX1Q8TDN6 353 aaKnown RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 PLEKHG4BQ96PX9 1271 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 NEU1Q99519 415 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 LRFN3Q9BTN0 628 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 MRPL46Q9H2W6 279 aaKnown RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 RNPEPQ9H4A4 650 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 BRD9Q9H8M2 597 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 SARS2Q9NP81 518 aaKnown RBP2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 KLHL11Q9NVR0 708 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 TRPM5Q9NZQ8 1165 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 ZDHHC8Q9ULC8 765 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 MYRFQ9Y2G1 1151 aa2.82□□□□□ -1.96
PTP4A1-204ENST00000578299 A0A1B0GTW7 788 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 CAPN8A6NHC0 703 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 ZNF185O15231 689 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 RPS6KA4O75676 772 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 AGFG2O95081 481 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 CHEK2O96017 543 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 HRGP04196 525 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 GNAI2P04899 355 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 HLA-DOAP06340 250 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 GJB1P08034 283 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 C1SP09871 688 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 MYBP10242 640 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 PTTG1IPP53801 180 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 NOMO3P69849 1222 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 MXRA7P84157 204 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 FOXE3Q13461 319 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 TUBA3CQ13748 450 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 HLTFQ14527 1009 aaKnown RBP eCLIP2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 KIF22Q14807 665 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 GRM3Q14832 879 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 PDCD4Q53EL6 469 aaKnown RBP2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 NOMO2Q5JPE7 1267 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 KHDC1LQ5JSQ8 128 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 MIIPQ5JXC2 388 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 EMC10Q5UCC4 262 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 ARMC6Q6NXE6 501 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 TUBA3EQ6PEY2 450 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 FOXR2Q6PJQ5 311 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 NPNTQ6UXI9 565 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 SPRED1Q7Z699 444 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 PPP1R3BQ86XI6 285 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 DGKHQ86XP1 1220 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 KIAA0319LQ8IZA0 1049 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 ZNF276Q8N554 614 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 PLBD2Q8NHP8 589 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 CACTINQ8WUQ7 758 aaKnown RBP2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 SLC25A43Q8WUT9 341 aaPredicted RBP2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 TNPO1Q92973 898 aaKnown RBP2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 SCAMP4Q969E2 229 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 ZNF503Q96F45 646 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 KLHL32Q96NJ5 620 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 MED15Q96RN5 788 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 PNKPQ96T60 521 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 C1orf43Q9BWL3 253 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 B3GNT5Q9BYG0 378 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 SIK2Q9H0K1 926 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 ARMT1Q9H993 441 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 SLAMF7Q9NQ25 335 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 AKIP1Q9NQ31 210 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 CNNM1Q9NRU3 951 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 RNF181Q9P0P0 153 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 DDX20Q9UHI6 824 aaKnown RBP2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 L1RE1Q9UN81 338 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 PCDHA1Q9Y5I3 950 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 FPGT-TNNI3KV9GXZ4 949 aa2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 FRMPD2Q68DX3 1309 aaPredicted RBP2.81□□□□□ -1.96
PTP4A1-204ENST00000578299 ARID1BQ8NFD5 2236 aaPredicted RBP2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 CCDC180Q9P1Z9 1646 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 TTBK1Q5TCY1 1321 aaPredicted RBP2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 A0A1W2PPL8 197 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 PRSS29PA6NIE9 313 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 MARCH11A6NNE9 402 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 A6NNZ2 444 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 PHGDHO43175 533 aaKnown RBP2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 NCR1O76036 304 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 PRSS23O95084 383 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 MATN4O95460 622 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 GPANK1O95872 356 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 ZBED1O96006 694 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 AHSGP02765 367 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 CFIP05156 583 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 RARBP10826 455 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 FCER1AP12319 257 aa2.8□□□□□ -1.96
PTP4A1-204ENST00000578299 LAG3P18627 525 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms