RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 TBC1D10BQ4KMP7 808 aaPredicted RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 STX19Q8N4C7 294 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 OTUB1Q96FW1 271 aaPredicted RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 RIT2Q99578 217 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 ILF2Q12905 390 aaKnown RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 MOXD1Q6UVY6 613 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 PNMA3Q9UL41 463 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 OVOS2A0A0G2JMS6 1433 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 CLRN2A0PK11 232 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 CTDNEP1O95476 244 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 ITGA8P53708 1063 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 TSTA3Q13630 321 aaPredicted RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 WASHC2DQ5SRD0 308 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 XRRA1Q6P2D8 792 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 PID1Q7Z2X4 250 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 YTHDF3Q7Z739 585 aaKnown RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 KIAA2013Q8IYS2 634 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 TNIP2Q8NFZ5 429 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 RAPGEF5Q92565 580 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 EXT2Q93063 718 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 CCT7Q99832 543 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 POLR3FQ9H1D9 316 aaPredicted RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 TULP4Q9NRJ4 1543 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 NYAP2Q9P242 653 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 DBR1Q9UK59 544 aaKnown RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 TARBP1Q13395 1621 aaKnown RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 TRPC5OSA6NMA1 111 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 ZNF197O14709 1029 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 WEE2P0C1S8 567 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 MCL1Q07820 350 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 MYBPC2Q14324 1141 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 SGSM1Q2NKQ1 1148 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 TRMT5Q32P41 509 aaKnown RBP11.27□□□□□ -0.61
SEC22B-201ENST00000578049 XKR3Q5GH77 459 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 SLC27A3Q5K4L6 730 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 LVRNQ6Q4G3 990 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 C4orf33Q8N1A6 199 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 SH3TC2Q8TF17 1288 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 MPP6Q9NZW5 540 aa11.27□□□□□ -0.61
SEC22B-201ENST00000578049 RSPH10B2B2RC85 870 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 RSPH10BP0C881 870 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CRKP46108 304 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 TSPY1Q01534 308 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ZCWPW2Q504Y3 356 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 DDX28Q9NUL7 540 aaKnown RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 PCDHGB4Q9UN71 923 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 GTPBP10A4D1E9 387 aaKnown RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 TBC1D4O60343 1298 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CALB2P22676 271 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 DPY19L2Q6NUT2 758 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 FAM196AQ6ZSG2 479 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 PPHLN1Q8NEY8 458 aaKnown RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CSF1RP07333 972 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 TRIM60Q495X7 471 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 EFHBQ8N7U6 833 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 RDM1Q8NG50 284 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 OR2W6PQ8NHA6 318 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CASKIN2Q8WXE0 1202 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ASCC2Q9H1I8 757 aaPredicted RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 RAB6BQ9NRW1 208 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 TRIM10Q9UDY6 481 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CLTCL1P53675 1640 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 HLFQ16534 295 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 TRIM69Q86WT6 500 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 LRRC6Q86X45 466 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 REEP2Q9BRK0 252 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CNTNAP5Q8WYK1 1306 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 NMT2O60551 498 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ZC3H11AO75152 810 aaKnown RBP eCLIP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ERVK-24P63145 666 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 KIF22Q14807 665 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 NLRP9Q7RTR0 991 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ADCK1Q86TW2 530 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 RIN3Q8TB24 985 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ZNF341Q9BYN7 854 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ABCF3Q9NUQ8 709 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 MTMR4Q9NYA4 1195 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 GABBR1Q9UBS5 961 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 XPO7Q9UIA9 1087 aaKnown RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CDYLQ9Y232 598 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 BRD2P25440 801 aaKnown RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 CNTFP26441 200 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 SKOR1P84550 965 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 BOLA3Q53S33 107 aa11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ATXN2LQ8WWM7 1075 aaKnown RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 FAM84BQ96KN1 310 aaPredicted RBP11.26□□□□□ -0.61
SEC22B-201ENST00000578049 ADGRA3Q8IWK6 1321 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 M0R3G1 203 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 MAFGO15525 162 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 SORBS3O60504 671 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 POLBP06746 335 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 BAG6P46379 1132 aa11.25□□□□□ -0.61
SEC22B-201ENST00000578049 ZBTB41Q5SVQ8 909 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms