RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 SHC4Q6S5L8 630 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 DYMQ7RTS9 669 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 IQUBQ8NA54 791 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 ACO2Q99798 780 aaKnown RBP17.48■□□□□ 0.39
VAPA-204ENST00000577901 TCHPQ9BT92 498 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 TARS2Q9BW92 718 aaKnown RBP17.48■□□□□ 0.39
VAPA-204ENST00000577901 CUEDC2Q9H467 287 aa17.48■□□□□ 0.39
VAPA-204ENST00000577901 LRRN2O75325 713 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 B3GAT3O94766 335 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 POU2F2P09086 479 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 IGFBP6P24592 240 aaPredicted RBP17.47■□□□□ 0.39
VAPA-204ENST00000577901 NUCB2P80303 420 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 UVSSAQ2YD98 709 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 HAUS6Q7Z4H7 955 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 DDX12PQ92771 950 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 SPATA32Q96LK8 384 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
VAPA-204ENST00000577901 HCFC1R1Q9NWW0 138 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 DNAH14Q0VDD8 3507 aa17.47■□□□□ 0.39
VAPA-204ENST00000577901 GVINP1Q7Z2Y8 2422 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 A0A087X0B3 334 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 KANSL1LA0AUZ9 987 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 MYMKA6NI61 221 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 TMEM189-UBE2V1I3L0A0 370 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 K7ENM7 598 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 CLCNKBP51801 687 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 AMPD3Q01432 767 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 MLF2Q15773 248 aaPredicted RBP17.46■□□□□ 0.39
VAPA-204ENST00000577901 ZNF568Q3ZCX4 644 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 PABPC1LQ4VXU2 614 aaKnown RBP17.46■□□□□ 0.39
VAPA-204ENST00000577901 GLRA4Q5JXX5 417 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 ZPBP2Q6X784 338 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 KCNN1Q92952 543 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 DHX58Q96C10 678 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 PPP1R10Q96QC0 940 aaKnown RBP17.46■□□□□ 0.39
VAPA-204ENST00000577901 KXD1Q9BQD3 176 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 SCAND2PQ9GZW5 306 aaPredicted RBP17.46■□□□□ 0.39
VAPA-204ENST00000577901 DNMT3BQ9UBC3 853 aaKnown RBP17.46■□□□□ 0.39
VAPA-204ENST00000577901 MTRRQ9UBK8 725 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 KCNH3Q9ULD8 1083 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 CDY1Q9Y6F8 540 aa17.46■□□□□ 0.39
VAPA-204ENST00000577901 GAP43P17677 238 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 PFKPQ01813 784 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 PRKCQQ04759 706 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 UPP1Q16831 310 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 SLC44A4Q53GD3 710 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 MPZL3Q6UWV2 235 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 RSPO2Q6UXX9 243 aaPredicted RBP17.45■□□□□ 0.38
VAPA-204ENST00000577901 RTL10Q7L3V2 364 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 NPAS3Q8IXF0 933 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 MAML2Q8IZL2 1156 aaPredicted RBP17.45■□□□□ 0.38
VAPA-204ENST00000577901 BICD1Q96G01 975 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 UROC1Q96N76 676 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 HINFPQ9BQA5 517 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 DDX23Q9BUQ8 820 aaKnown RBP17.45■□□□□ 0.38
VAPA-204ENST00000577901 BCO2Q9BYV7 579 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 TNMDQ9H2S6 317 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 PTPRHQ9HD43 1115 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 SEL1LQ9UBV2 794 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 TBX20Q9UMR3 447 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 BACE2Q9Y5Z0 518 aa17.45■□□□□ 0.38
VAPA-204ENST00000577901 MYH11P35749 1972 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 I3L4J1 428 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 POLR2DO15514 142 aaKnown RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 CLDN3O15551 220 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 TRAPPC3O43617 180 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 TOM1L1O75674 476 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 MCF2P10911 925 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 IDEP14735 1019 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 PROZP22891 400 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 TKTP29401 623 aaKnown RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 YARSP54577 528 aaKnown RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 UBXN2BQ14CS0 331 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 RESP18Q5W5W9 173 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 ADALQ6DHV7 355 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 CD300LGQ6UXG3 332 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 ANKS3Q6ZW76 656 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 KIAA2013Q8IYS2 634 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 LEO1Q8WVC0 666 aaPredicted RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 ING5Q8WYH8 240 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 CCDC94Q9BW85 323 aaPredicted RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 CDT1Q9H211 546 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 GOLGA2P5Q9HBQ8 144 aa17.44■□□□□ 0.38
VAPA-204ENST00000577901 SPATA6Q9NWH7 488 aaPredicted RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 MRPS23Q9Y3D9 190 aaKnown RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 MTF2Q9Y483 593 aaPredicted RBP17.44■□□□□ 0.38
VAPA-204ENST00000577901 COL4A3Q01955 1670 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 FAM170BA6NMN3 283 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 NMT1P30419 496 aaKnown RBP17.43■□□□□ 0.38
VAPA-204ENST00000577901 GRM5P41594 1212 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 MATR3P43243 847 aaKnown RBP eCLIP17.43■□□□□ 0.382e-6■■■■□ 22.8
VAPA-204ENST00000577901 LIG4P49917 911 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 GTF2BQ00403 316 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 E2F4Q16254 413 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 CCDC65Q8IXS2 484 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 RUBCNQ92622 972 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 RMDN1Q96DB5 314 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 DDX27Q96GQ7 796 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms