RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 LDAHQ9H6V9 325 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 ZNF703Q9H7S9 590 aaPredicted RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 RNF181Q9P0P0 153 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 EIF2B4Q9UI10 523 aaKnown RBP3.16□□□□□ -1.9
COPS3-213ENST00000577210 TPCN1Q9ULQ1 816 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 L1RE1Q9UN81 338 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 PCDHA3Q9Y5H8 950 aa3.16□□□□□ -1.9
COPS3-213ENST00000577210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.16□□□□□ -1.9
COPS3-213ENST00000577210 CFAP69A5D8W1 941 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 MYO1CO00159 1063 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 F2RL2O00254 374 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 RNASET2O00584 256 aaKnown RBP3.15□□□□□ -1.91
COPS3-213ENST00000577210 TPP1O14773 563 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 RARBP10826 455 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 CYP2C9P11712 490 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 RHCEP18577 417 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 HK1P19367 917 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 GCSHP23434 173 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 KCNJ5P48544 419 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 RAP2BP61225 183 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 POU6F2P78424 691 aaPredicted RBP3.15□□□□□ -1.91
COPS3-213ENST00000577210 RHDQ02161 417 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 ZNF844Q08AG5 666 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 IFIT5Q13325 482 aaKnown RBP3.15□□□□□ -1.91
COPS3-213ENST00000577210 OS9Q13438 667 aaPredicted RBP3.15□□□□□ -1.91
COPS3-213ENST00000577210 KIF22Q14807 665 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 KIAA0753Q2KHM9 967 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 FAM214AQ32MH5 1076 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 CCDC93Q567U6 631 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 KHDC1LQ5JSQ8 128 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 RNF220Q5VTB9 566 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 ZNF783Q6ZMS7 281 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 DBX2Q6ZNG2 339 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 MED25Q71SY5 747 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 OVCH2Q7RTZ1 564 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 FAM90A1Q86YD7 464 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 TMPRSS6Q8IU80 811 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 CCDC146Q8IYE0 955 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 ZGPATQ8N5A5 531 aaKnown RBP3.15□□□□□ -1.91
COPS3-213ENST00000577210 MB21D1Q8N884 522 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 STON2Q8WXE9 905 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 LRTOMTQ8WZ04 291 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 DMRTA2Q96SC8 542 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 CNPPD1Q9BV87 410 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 KLC2Q9H0B6 622 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 MRPL46Q9H2W6 279 aaKnown RBP3.15□□□□□ -1.91
COPS3-213ENST00000577210 CD248Q9HCU0 757 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 DDX21Q9NR30 783 aaKnown RBP eCLIP3.15□□□□□ -1.91
COPS3-213ENST00000577210 GABBR1Q9UBS5 961 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 RUVBL1Q9Y265 456 aaKnown RBP3.15□□□□□ -1.91
COPS3-213ENST00000577210 TSC22D4Q9Y3Q8 395 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 PLEKHM1Q9Y4G2 1056 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 XDHP47989 1333 aa3.15□□□□□ -1.91
COPS3-213ENST00000577210 DRGXA6NNA5 263 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 NT5C1B-RDH14C9J2C7 533 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 E7ENX8 843 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 PRPF3O43395 683 aaKnown RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 GJB1P08034 283 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 FPR1P21462 350 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 PTGS2P35354 604 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 RABGGTBP53611 331 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 ZNF280AP59817 542 aaPredicted RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 BLOC1S1P78537 153 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 NHLH2Q02577 135 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 TAP2Q03519 686 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 RAB32Q13637 225 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 PLS1Q14651 629 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 RRP1BQ14684 758 aaKnown RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 ICAM4Q14773 271 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 GRM3Q14832 879 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 BRD3Q15059 726 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 CNN3Q15417 329 aaKnown RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 RABL3Q5HYI8 236 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 KSR2Q6VAB6 950 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 Q6ZSN1 163 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 GDF7Q7Z4P5 450 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 XYLT1Q86Y38 959 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 COLGALT2Q8IYK4 626 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 KRT78Q8N1N4 520 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 SYNE4Q8N205 404 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 SDR16C5Q8N3Y7 309 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 ZNF808Q8N4W9 903 aaPredicted RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 PJA1Q8NG27 643 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 OR6B3Q8NGW1 331 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 SLC35B2Q8TB61 432 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 TBC1D15Q8TC07 691 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 TNPO1Q92973 898 aaKnown RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 SMOQ99835 787 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 LSM14BQ9BX40 385 aaKnown RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 B3GNT5Q9BYG0 378 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 GSTO2Q9H4Y5 243 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 RSAD1Q9HA92 442 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 ARNT2Q9HBZ2 717 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 GPR35Q9HC97 309 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 KIAA1586Q9HCI6 787 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 SERHLQ9NQF3 203 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 ZSCAN32Q9NX65 697 aa3.14□□□□□ -1.91
COPS3-213ENST00000577210 RGS17Q9UGC6 210 aaPredicted RBP3.14□□□□□ -1.91
COPS3-213ENST00000577210 SLC23A1Q9UHI7 598 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms