RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 CUEDC2Q9H467 287 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 KCNK12Q9HB15 430 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 IGSF9Q9P2J2 1179 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 CFAP45Q9UL16 551 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 CITO14578 2027 aa16.85■□□□□ 0.29
SF3B3-215ENST00000577085 ANKRD63C9JTQ0 380 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 LRG1P02750 347 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 LRPAP1P30533 357 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 ALCAMQ13740 583 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 JADE1Q6IE81 842 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 SLC39A4Q6P5W5 647 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 IQUBQ8NA54 791 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 DHX58Q96C10 678 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 DNAJC19Q96DA6 116 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 ASIC4Q96FT7 647 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 KCNH6Q9H252 994 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 TNMDQ9H2S6 317 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 OLFML3Q9NRN5 406 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 FAM13BQ9NYF5 915 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 CPSF3Q9UKF6 684 aaKnown RBP16.84■□□□□ 0.29
SF3B3-215ENST00000577085 FBXL21Q9UKT6 434 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 PCDHB8Q9UN66 801 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 DENND4AQ7Z401 1863 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 TRIP11Q15643 1979 aa16.84■□□□□ 0.29
SF3B3-215ENST00000577085 A0A087X0B3 334 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 FAM189A1O60320 539 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 CPB1P15086 417 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 ROR1Q01973 937 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 YWHAHQ04917 246 aaPredicted RBP16.83■□□□□ 0.28
SF3B3-215ENST00000577085 L1TD1Q5T7N2 865 aaKnown RBP16.83■□□□□ 0.28
SF3B3-215ENST00000577085 C2orf16Q68DN1 1984 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 ATL3Q6DD88 541 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 SLC8B1Q6J4K2 584 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 RSPO2Q6UXX9 243 aaPredicted RBP16.83■□□□□ 0.28
SF3B3-215ENST00000577085 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
SF3B3-215ENST00000577085 ASB7Q9H672 318 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 CYP4F11Q9HBI6 524 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 EPS15L1Q9UBC2 864 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 FBXL5Q9UKA1 691 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 DERAQ9Y315 318 aa16.83■□□□□ 0.28
SF3B3-215ENST00000577085 ZFP37Q9Y6Q3 630 aaPredicted RBP16.83■□□□□ 0.28
SF3B3-215ENST00000577085 ARHGEF37A1IGU5 675 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 TISP43B9A030 160 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 N4BP1O75113 896 aaKnown RBP16.82■□□□□ 0.28
SF3B3-215ENST00000577085 PAPLNO95428 1278 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 NFICP08651 508 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 ZBTB6Q15916 424 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 SPATA1Q5VX52 437 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 TPGS2Q68CL5 300 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 ELMOD1Q8N336 334 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 NXPE3Q969Y0 559 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 MYADMQ96S97 322 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 PRRX2Q99811 253 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 OXCT2Q9BYC2 517 aaPredicted RBP16.82■□□□□ 0.28
SF3B3-215ENST00000577085 SMOC2Q9H3U7 446 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 TMEM206Q9H813 350 aa16.82■□□□□ 0.28
SF3B3-215ENST00000577085 MTCL1Q9Y4B5 1905 aaKnown RBP16.82■□□□□ 0.28
SF3B3-215ENST00000577085 VWA8A3KMH1 1905 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 WDR27A2RRH5 827 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 M0QZQ0 153 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 PPP1R37O75864 691 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 IL18RAPO95256 599 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 ODC1P11926 461 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 LAMP2P13473 410 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 ATF2P15336 505 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 RFX1P22670 979 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 PAX3P23760 479 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 GUCY2FP51841 1108 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 ASIC1P78348 528 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 PABPC1LQ4VXU2 614 aaKnown RBP16.81■□□□□ 0.28
SF3B3-215ENST00000577085 FAM213AQ9BRX8 229 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 DUSP12Q9UNI6 340 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 TIMM13Q9Y5L4 95 aaPredicted RBP16.81■□□□□ 0.28
SF3B3-215ENST00000577085 STYXL1Q9Y6J8 313 aa16.81■□□□□ 0.28
SF3B3-215ENST00000577085 MYH15Q9Y2K3 1946 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 FRMD3A2A2Y4 597 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 ABLIM3O94929 683 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 LDHAP00338 332 aaKnown RBP16.8■□□□□ 0.28
SF3B3-215ENST00000577085 ADRB2P07550 413 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 POU2F2P09086 479 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 CASP5P51878 434 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 NTHL1P78549 312 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 POU5F1Q01860 360 aaKnown RBP16.8■□□□□ 0.28
SF3B3-215ENST00000577085 ADCY1Q08828 1119 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 KCNA1Q09470 495 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 MRPL58Q14197 206 aaKnown RBP16.8■□□□□ 0.28
SF3B3-215ENST00000577085 C9orf57Q5W0N0 161 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 SHC4Q6S5L8 630 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 RSAD2Q8WXG1 361 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 PYM1Q9BRP8 204 aaKnown RBP16.8■□□□□ 0.28
SF3B3-215ENST00000577085 MAGEF1Q9HAY2 307 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 CDH7Q9ULB5 785 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 MAFFQ9ULX9 164 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 MRPS23Q9Y3D9 190 aaKnown RBP16.8■□□□□ 0.28
SF3B3-215ENST00000577085 TRIOO75962 3097 aa16.8■□□□□ 0.28
SF3B3-215ENST00000577085 STK25O00506 426 aa16.79■□□□□ 0.28
SF3B3-215ENST00000577085 POLR2DO15514 142 aaKnown RBP16.79■□□□□ 0.28
SF3B3-215ENST00000577085 TBC1D4O60343 1298 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms