RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 DUOXA2Q1HG44 320 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 FAM171A1Q5VUB5 890 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 INTS8Q75QN2 995 aaKnown RBP17.57■□□□□ 0.4
PFN1-203ENST00000574872 CEP57Q86XR8 500 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 PARD3BQ8TEW8 1205 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 PPM1EQ8WY54 764 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 ZNF516Q92618 1163 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 MED15Q96RN5 788 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 HERC2P3Q9BVR0 1158 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 DACH1Q9UI36 760 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 AGAP1Q9UPQ3 857 aa17.57■□□□□ 0.4
PFN1-203ENST00000574872 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.56■□□□□ 0.4
PFN1-203ENST00000574872 ANO9A1A5B4 782 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 FSCN2O14926 492 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 MAPK13O15264 365 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 SLC16A3O15427 465 aaKnown RBP17.56■□□□□ 0.4
PFN1-203ENST00000574872 EFEMP2O95967 443 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 URODP06132 367 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 CCDC85BQ15834 202 aaPredicted RBP17.56■□□□□ 0.4
PFN1-203ENST00000574872 STX1AQ16623 288 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 KIAA1841Q6NSI8 718 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 TRAPPC11Q7Z392 1133 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 ADGRD2Q7Z7M1 963 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 RNF168Q8IYW5 571 aaPredicted RBP17.56■□□□□ 0.4
PFN1-203ENST00000574872 MKNK1Q9BUB5 465 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 MMRN2Q9H8L6 949 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 SIX4Q9UIU6 781 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 ITGA11Q9UKX5 1188 aa17.56■□□□□ 0.4
PFN1-203ENST00000574872 ATG2AQ2TAZ0 1938 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 HIDE1A8MVS5 230 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 PIRO00625 290 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 SPTLC1O15269 473 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 CXCL14O95715 111 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 CTSAP10619 480 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 TKTP29401 623 aaKnown RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 GLUD2P49448 558 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 TYRO3Q06418 890 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 ELAVL2Q12926 359 aaKnown RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 BFSP1Q12934 665 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 BIRC3Q13489 604 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 SMC1AQ14683 1233 aaKnown RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 PTPN14Q15678 1187 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 USP41Q3LFD5 358 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 CCDC40Q4G0X9 1142 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 TIGD5Q53EQ6 642 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 TCEAL5Q5H9L2 206 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 DCAF17Q5H9S7 520 aaPredicted RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 RTP2Q5QGT7 225 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 C1orf220Q5T0J3 134 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 C11orf57Q6ZUT1 292 aaPredicted RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 RBM23Q86U06 439 aaKnown RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 CXorf38Q8TB03 319 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 TMC2Q8TDI7 906 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 RIN2Q8WYP3 895 aaPredicted RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 CEP63Q96MT8 703 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 SRRTQ9BXP5 876 aaKnown RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 NSUN3Q9H649 340 aaKnown RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 NGRNQ9NPE2 291 aaKnown RBP17.55■□□□□ 0.4
PFN1-203ENST00000574872 ANO10Q9NW15 660 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 LMCD1Q9NZU5 365 aa17.55■□□□□ 0.4
PFN1-203ENST00000574872 SYCE3A1L190 88 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 PER2O15055 1255 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 TRAPPC3O43617 180 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 PHACTR2O75167 634 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 CLSTN1O94985 981 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 POU3F3P20264 500 aaPredicted RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 GCLMP48507 274 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 TAF6P49848 677 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 LILRA4P59901 499 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 RBP5P82980 135 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 BMS1Q14692 1282 aaKnown RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 TPD52L1Q16890 204 aaPredicted RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 SKOR2Q2VWA4 1001 aaPredicted RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 TCERG1LQ5VWI1 586 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 TDRD10Q5VZ19 366 aaKnown RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 FOXR2Q6PJQ5 311 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 PRSS55Q6UWB4 352 aaPredicted RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 DSTYKQ6XUX3 929 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 FILIP1Q7Z7B0 1213 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 USP37Q86T82 979 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 BORCS6Q96GS4 357 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 ZNF560Q96MR9 790 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 TTPALQ9BTX7 342 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 MRPL17Q9NRX2 175 aaKnown RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 STK39Q9UEW8 545 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 ARMCX3Q9UH62 379 aaPredicted RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 R3HCC1Q9Y3T6 440 aaKnown RBP17.54■□□□□ 0.4
PFN1-203ENST00000574872 SCN1AP35498 2009 aa17.54■□□□□ 0.4
PFN1-203ENST00000574872 C2orf71A6NGG8 1288 aa17.53■□□□□ 0.4
PFN1-203ENST00000574872 ERCC5P28715 1186 aaPredicted RBP17.53■□□□□ 0.4
PFN1-203ENST00000574872 GTF2F1P35269 517 aaKnown RBP eCLIP17.53■□□□□ 0.48e-11■■■□□ 17.6
PFN1-203ENST00000574872 CLDN10P78369 228 aa17.53■□□□□ 0.4
PFN1-203ENST00000574872 DSG1Q02413 1049 aa17.53■□□□□ 0.4
PFN1-203ENST00000574872 PPP3CAQ08209 521 aa17.53■□□□□ 0.4
PFN1-203ENST00000574872 PDE12Q6L8Q7 609 aaKnown RBP17.53■□□□□ 0.4
PFN1-203ENST00000574872 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.53■□□□□ 0.4
PFN1-203ENST00000574872 CREBRFQ8IUR6 639 aa17.53■□□□□ 0.4
PFN1-203ENST00000574872 MRPL43Q8N983 215 aaKnown RBP17.53■□□□□ 0.4
PFN1-203ENST00000574872 SUSD3Q96L08 255 aa17.53■□□□□ 0.4
PFN1-203ENST00000574872 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms