RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 BCS1LQ9Y276 419 aa10.15□□□□□ -0.79
CCDC40-212ENST00000574799 IKBKGQ9Y6K9 419 aa10.15□□□□□ -0.79
CCDC40-212ENST00000574799 MEIS1O00470 390 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 CLDN3O15551 220 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 PSMG1O95456 288 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 TMEM253P0C7T8 217 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 GM2AP17900 193 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 COMTP21964 271 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 MARCKSL1P49006 195 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 CCNG1P51959 295 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ARFIP2P53365 341 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ITGA8P53708 1063 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 DSG1Q02413 1049 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 MAP3K10Q02779 954 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 P3H1Q32P28 736 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ETNPPLQ8TBG4 499 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 MAML1Q92585 1016 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 RILPQ96NA2 401 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF277Q9NRM2 450 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 DDX25Q9UHL0 483 aaKnown RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ASB3Q9Y575 518 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 hCG_1984214I3L0E3 225 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 SUPT3HO75486 399 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 TTC4O95801 387 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 PLS3P13797 630 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 SERPINB6P35237 376 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 SOX5P35711 763 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 MED21Q13503 144 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 GRAMD1BQ3KR37 738 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 CERKLQ49MI3 558 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 Q4G0T1 1027 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 C4orf50Q6ZRC1 276 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 RIBC1Q8N443 379 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF713Q8N859 430 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 SMC1BQ8NDV3 1235 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 PRPF31Q8WWY3 499 aaKnown RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ARHGEF26Q96DR7 871 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 GMCL1Q96IK5 515 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 PWWP2AQ96N64 755 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 FAM118BQ9BPY3 351 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 HEMGNQ9BXL5 484 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 DHX36Q9H2U1 1008 aaKnown RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 SAYSD1Q9NPB0 183 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 DDX18Q9NVP1 670 aaKnown RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 HEY2Q9UBP5 337 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 CYP3A7-CYP3A51PA0A087WV96 503 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 BTNL10A8MVZ5 291 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 POTECB2RU33 542 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ATMINO43313 823 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 NDUFB10O96000 172 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 LYNP07948 512 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 IMPDH2P12268 514 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 CYP3A7P24462 503 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 PIK3CAP42336 1068 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 AP2B1P63010 937 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 PPP2R5CQ13362 524 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ZC2HC1CQ53FD0 456 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 COBLL1Q53SF7 1204 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 RSBN1LQ6PCB5 846 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-212ENST00000574799 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ACER1Q8TDN7 264 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 ATG4AQ8WYN0 398 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 DNAJC19Q96DA6 116 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 SNF8Q96H20 258 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 TUBB6Q9BUF5 446 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 GRHL1Q9NZI5 618 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 FRMD4BQ9Y2L6 1034 aa10.14□□□□□ -0.79
CCDC40-212ENST00000574799 A0A0A6YYK5 440 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-212ENST00000574799 F5H6K3 240 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 GOLGA8RI6L899 631 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 ZNF189O75820 626 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-212ENST00000574799 FAM13AO94988 1023 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 FOXN2P32314 431 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 DRG2P55039 364 aaKnown RBP10.13□□□□□ -0.79
CCDC40-212ENST00000574799 MGAT5Q09328 741 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 HYIQ5T013 277 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 DAB2IPQ5VWQ8 1189 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 MFSD5Q6N075 450 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 FAM186BQ8IYM0 893 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 TAB3Q8N5C8 712 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-212ENST00000574799 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 NSL1Q96IY1 281 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 TRAF3IP3Q9Y228 551 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 ANKRD63C9JTQ0 380 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 FAM86B1E9PN63 330 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 IFNB1P01574 187 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 FAM86B2P0C5J1 330 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 PSMC4P43686 418 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 KDSRQ06136 332 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 MPP2Q14168 576 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 PIP4K2CQ8TBX8 421 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 CCDC110Q8TBZ0 833 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 GRK7Q8WTQ7 553 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 CFAP57Q96MR6 1250 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 THTPAQ9BU02 230 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 EPB41L4BQ9H329 900 aa10.13□□□□□ -0.79
CCDC40-212ENST00000574799 SMYD3Q9H7B4 428 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms