RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 VCX3AQ9NNX9 186 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 ANKFY1Q9P2R3 1169 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 ZNF212Q9UDV6 495 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 SMG5Q9UPR3 1016 aaKnown RBP15.27■□□□□ 0.03
SMG6-215ENST00000574501 C10orf71Q711Q0 1435 aa15.27■□□□□ 0.03
SMG6-215ENST00000574501 ZBTB5O15062 677 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 PLSCR1O15162 318 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 HNRNPCL1O60812 293 aaKnown RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 TROVE2P10155 538 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMG6-215ENST00000574501 KRT4P19013 534 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 GCLMP48507 274 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 ZBTB16Q05516 673 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 ZNF543Q08ER8 600 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 P3H1Q32P28 736 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 PABPC1LQ4VXU2 614 aaKnown RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 SPDYAQ5MJ70 313 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 TBC1D9BQ66K14 1250 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 RIBC1Q8N443 379 aaPredicted RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 PLVAPQ9BX97 442 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 ASCC2Q9H1I8 757 aaPredicted RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 PCIF1Q9H4Z3 704 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 VPS37BQ9H9H4 285 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 OLFML3Q9NRN5 406 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 PHF24Q9UPV7 400 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 COL16A1Q07092 1604 aaPredicted RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 TYROBPO43914 113 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 CYP1A2P05177 515 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 AKR1B1P15121 316 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 CCNFP41002 786 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 GSTO1P78417 241 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 NR1H3Q13133 447 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 LIN52Q52LA3 116 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 DPP8Q6V1X1 898 aaPredicted RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 SYDE1Q6ZW31 735 aaPredicted RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 SMIM5Q71RC9 77 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 GSTA5Q7RTV2 222 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 TTC7BQ86TV6 843 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 CFAP57Q96MR6 1250 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 P2RX7Q99572 595 aaKnown RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 MKNK1Q9BUB5 465 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 ATXN10Q9UBB4 475 aa15.26■□□□□ 0.03
SMG6-215ENST00000574501 NOCTQ9UK39 431 aaKnown RBP15.26■□□□□ 0.03
SMG6-215ENST00000574501 EML1O00423 815 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 SNHG28P0DPA3 235 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 ESRRAP11474 423 aaPredicted RBP15.25■□□□□ 0.03
SMG6-215ENST00000574501 ITPK1Q13572 414 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 MYBPC3Q14896 1274 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 GSTA3Q16772 222 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 WDR66Q8TBY9 1149 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 ELMO3Q96BJ8 720 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 FAM161BQ96MY7 647 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 NR1H4Q96RI1 486 aaPredicted RBP15.25■□□□□ 0.03
SMG6-215ENST00000574501 CYTH2Q99418 400 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 GALNT8Q9NY28 637 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 ANAPC7Q9UJX3 599 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 TISP43B9A030 160 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 GOLGA8RI6L899 631 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 CALCAP01258 141 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 RALAP11233 206 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 PGM1P36871 562 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 NOVP48745 357 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 FMO1Q01740 532 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 PPP3CAQ08209 521 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 CFAP157Q5JU67 520 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 LRRC6Q86X45 466 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 ARHGAP18Q8N392 663 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 CYP2W1Q8TAV3 490 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 NAP1L4Q99733 375 aaKnown RBP15.25■□□□□ 0.03
SMG6-215ENST00000574501 EIF2AK1Q9BQI3 630 aaKnown RBP15.25■□□□□ 0.03
SMG6-215ENST00000574501 KCNQ5Q9NR82 932 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 ARMCX1Q9P291 453 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 NEU2Q9Y3R4 380 aa15.25■□□□□ 0.03
SMG6-215ENST00000574501 UMODL1Q5DID0 1318 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 EIF3DO15371 548 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMG6-215ENST00000574501 BAG2O95816 211 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 MAN1A1P33908 653 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 INHBCP55103 352 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 SEPT7Q16181 437 aaKnown RBP15.24■□□□□ 0.03
SMG6-215ENST00000574501 SDCCAG8Q86SQ7 713 aaPredicted RBP15.24■□□□□ 0.03
SMG6-215ENST00000574501 CCDC89Q8N998 374 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 GLIS1Q8NBF1 620 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 KLF6Q99612 283 aaPredicted RBP15.24■□□□□ 0.03
SMG6-215ENST00000574501 TTC1Q99614 292 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 ANKRD2Q9GZV1 360 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 ETNK2Q9NVF9 386 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 DNAAF2Q9NVR5 837 aaKnown RBP15.24■□□□□ 0.03
SMG6-215ENST00000574501 DMAC2Q9NW81 257 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 DDX43Q9NXZ2 648 aaKnown RBP15.24■□□□□ 0.03
SMG6-215ENST00000574501 PCDHA1Q9Y5I3 950 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 CYP3A7-CYP3A51PA0A087WV96 503 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 A6NJR5 290 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 RNASEH1O60930 286 aaKnown RBP15.24■□□□□ 0.03
SMG6-215ENST00000574501 USP1O94782 785 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 ZSCAN5DPP0CG00 497 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 GZMAP12544 262 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 CYP3A7P24462 503 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms