RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 LIMD1Q9UGP4 676 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 FBXW11Q9UKB1 542 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 MORC2Q9Y6X9 1032 aaPredicted RBP10.89□□□□□ -0.67
RPA1-206ENST00000573994 PLXNA3P51805 1871 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 TECTAO75443 2155 aa10.89□□□□□ -0.67
RPA1-206ENST00000573994 FAM189A1O60320 539 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 N4BP1O75113 896 aaKnown RBP10.88□□□□□ -0.67
RPA1-206ENST00000573994 PIGRP01833 764 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 CLTAP09496 248 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 MCM4P33991 863 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 OR1D2P34982 312 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 PPP2R3AQ06190 1150 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 LIN9Q5TKA1 542 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 PDXDC1Q6P996 788 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 LILRA6Q6PI73 481 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 CYP26C1Q6V0L0 522 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 C15orf39Q6ZRI6 1047 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 CCDC73Q6ZRK6 1079 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 GET4Q7L5D6 327 aaPredicted RBP10.88□□□□□ -0.67
RPA1-206ENST00000573994 MAP4K3Q8IVH8 894 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 LINC00301Q8NCQ3 95 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 HDAC7Q8WUI4 952 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 ACSF2Q96CM8 615 aaPredicted RBP10.88□□□□□ -0.67
RPA1-206ENST00000573994 PLEKHA4Q9H4M7 779 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 PIDD1Q9HB75 910 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 TBC1D7Q9P0N9 293 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 MTRRQ9UBK8 725 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 NUB1Q9Y5A7 615 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.88□□□□□ -0.67
RPA1-206ENST00000573994 CDY1Q9Y6F8 540 aa10.88□□□□□ -0.67
RPA1-206ENST00000573994 LACTBL1A8MY62 500 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ANKRD63C9JTQ0 380 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 SPTLC2O15270 562 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 OGTO15294 1046 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 CCL16O15467 120 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 TRAPPC3O43617 180 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ZMYND10O75800 440 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 C8AP07357 584 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 IDEP14735 1019 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 GBP2P32456 591 aaPredicted RBP10.87□□□□□ -0.67
RPA1-206ENST00000573994 GTF2BQ00403 316 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 SIGLEC14Q08ET2 396 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 MTMR3Q13615 1198 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 PKP1Q13835 747 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ENOX2Q16206 610 aaKnown RBP10.87□□□□□ -0.67
RPA1-206ENST00000573994 SV2BQ7L1I2 683 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 OTOP3Q7RTS5 596 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ZDHHC14Q8IZN3 488 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ST13P5Q8NFI4 369 aaPredicted RBP10.87□□□□□ -0.67
RPA1-206ENST00000573994 SLC7A14Q8TBB6 771 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 PBXIP1Q96AQ6 731 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ASIC4Q96FT7 647 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ZNF396Q96N95 335 aaPredicted RBP10.87□□□□□ -0.67
RPA1-206ENST00000573994 MYADMQ96S97 322 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 FGFBP2Q9BYJ0 223 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 RHOBTB2Q9BYZ6 727 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 PRKD2Q9BZL6 878 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 RPF1Q9H9Y2 349 aaKnown RBP10.87□□□□□ -0.67
RPA1-206ENST00000573994 WDR6Q9NNW5 1121 aaKnown RBP10.87□□□□□ -0.67
RPA1-206ENST00000573994 ZDHHC7Q9NXF8 308 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 SORCS3Q9UPU3 1222 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 USTQ9Y2C2 406 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
RPA1-206ENST00000573994 ZDBF2Q9HCK1 2354 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 A0A0B4J269 797 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 TTC26A0AVF1 554 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 TULP1O00294 542 aaPredicted RBP10.86□□□□□ -0.67
RPA1-206ENST00000573994 PPEF2O14830 753 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 F13A1P00488 732 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 PDGFBP01127 241 aaPredicted RBP10.86□□□□□ -0.67
RPA1-206ENST00000573994 NFICP08651 508 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 ZSCAN22P10073 491 aaPredicted RBP10.86□□□□□ -0.67
RPA1-206ENST00000573994 RPL9P32969 192 aaKnown RBP10.86□□□□□ -0.67
RPA1-206ENST00000573994 ACOT2P49753 483 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 CASP5P51878 434 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 ARPP19P56211 112 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 NTHL1P78549 312 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 KCNC4Q03721 635 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 KYAT1Q16773 422 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 PPM1LQ5SGD2 360 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 ANKS3Q6ZW76 656 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 GRASPQ7Z6J2 395 aaPredicted RBP10.86□□□□□ -0.67
RPA1-206ENST00000573994 STAMQ92783 540 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 TATDN2Q93075 761 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 DNAJC19Q96DA6 116 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 MRPL44Q9H9J2 332 aaKnown RBP10.86□□□□□ -0.67
RPA1-206ENST00000573994 POLIQ9UNA4 740 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 DENND4AQ7Z401 1863 aa10.86□□□□□ -0.67
RPA1-206ENST00000573994 GCNT3O95395 438 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 YEATS4O95619 227 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 GAP43P17677 238 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 PLA2G5P39877 138 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 VCPP55072 806 aaKnown RBP10.85□□□□□ -0.67
RPA1-206ENST00000573994 ROR1Q01973 937 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 KCNA1Q09470 495 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 RAB33AQ14088 237 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 AXDND1Q5T1B0 1012 aaPredicted RBP10.85□□□□□ -0.67
RPA1-206ENST00000573994 ADALQ6DHV7 355 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 JADE1Q6IE81 842 aa10.85□□□□□ -0.67
RPA1-206ENST00000573994 ZNF720Q7Z2F6 126 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms