RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 GNA11P29992 359 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 SREBF1P36956 1147 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
CIITA-208ENST00000572665 MAP7Q14244 749 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 MIS18BP1Q6P0N0 1132 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 EP400NLQ6ZTU2 488 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 ARMCX6Q7L4S7 300 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 DPH6Q7L8W6 267 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 RAB11FIP4Q86YS3 637 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 CMTR2Q8IYT2 770 aaKnown RBP10.47□□□□□ -0.73
CIITA-208ENST00000572665 BICD2Q8TD16 824 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 FAM122AQ96E09 287 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 FAM49AQ9H0Q0 323 aaPredicted RBP10.47□□□□□ -0.73
CIITA-208ENST00000572665 TNKS2Q9H2K2 1166 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 AGO4Q9HCK5 861 aaKnown RBP10.47□□□□□ -0.73
CIITA-208ENST00000572665 C6orf50Q9HD87 102 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
CIITA-208ENST00000572665 COL1A2P08123 1366 aa10.47□□□□□ -0.73
CIITA-208ENST00000572665 KLF18A0A0U1RQI7 1052 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 A0A1W2PQH9 124 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 FSD2A1L4K1 749 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 MEIS1O00470 390 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 GATA4P43694 442 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 METAP2P50579 478 aaKnown RBP eCLIP10.46□□□□□ -0.73
CIITA-208ENST00000572665 EXOSC10Q01780 885 aaKnown RBP10.46□□□□□ -0.73
CIITA-208ENST00000572665 RAB33AQ14088 237 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 PLCB4Q15147 1175 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 PPP2R5EQ16537 467 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 ZNF484Q5JVG2 852 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 MARCH8Q5T0T0 291 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 SEZ6L2Q6UXD5 910 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 FAM178BQ8IXR5 827 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.46□□□□□ -0.73
CIITA-208ENST00000572665 NEK9Q8TD19 979 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 P2RX5Q93086 422 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 CELF4Q9BZC1 486 aaKnown RBP10.46□□□□□ -0.73
CIITA-208ENST00000572665 UPF3BQ9BZI7 483 aaKnown RBP10.46□□□□□ -0.73
CIITA-208ENST00000572665 TBC1D22BQ9NU19 505 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 CLDND1Q9NY35 253 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 CEP131Q9UPN4 1083 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 IGSF9BQ9UPX0 1349 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 KDM3AQ9Y4C1 1321 aa10.46□□□□□ -0.73
CIITA-208ENST00000572665 FAM95CA0A1B0GW59 222 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 ESYT2A0FGR8 921 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 PI4K2BG5E9Z4 385 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 STXBP3O00186 592 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 DGKIO75912 1065 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 SCG2P13521 617 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 PSMA5P28066 241 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 POLR2BP30876 1174 aaKnown RBP10.45□□□□□ -0.74
CIITA-208ENST00000572665 CD52P31358 61 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 PLA2G5P39877 138 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 SERINC3Q13530 473 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 PFKFB3Q16875 520 aaPredicted RBP10.45□□□□□ -0.74
CIITA-208ENST00000572665 TCEAL5Q5H9L2 206 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 MTHFD1LQ6UB35 978 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 PLA2G4DQ86XP0 818 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 SMAP1Q8IYB5 467 aaPredicted RBP10.45□□□□□ -0.74
CIITA-208ENST00000572665 PHACTR4Q8IZ21 702 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 CCDC148Q8NFR7 591 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 ATP8B4Q8TF62 1192 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 CYB5D2Q8WUJ1 264 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 ZNF689Q96CS4 500 aaPredicted RBP10.45□□□□□ -0.74
CIITA-208ENST00000572665 TRIM55Q9BYV6 548 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 KCNF1Q9H3M0 494 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 ZNF302Q9NR11 478 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 C1orf112Q9NSG2 853 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 PADI3Q9ULW8 664 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 TELO2Q9Y4R8 837 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 PCDHB7Q9Y5E2 793 aa10.45□□□□□ -0.74
CIITA-208ENST00000572665 IGKV6D-21A0A0A0MT36 114 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 DENND3A2RUS2 1198 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 IPO5O00410 1097 aaKnown RBP10.44□□□□□ -0.74
CIITA-208ENST00000572665 RGS13O14921 159 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 RPS6KA5O75582 802 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 REC8O95072 547 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 MMP1P03956 469 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 CYP3A4P08684 503 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 ARP10275 920 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 KLRC1P26715 233 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 TMOD1P28289 359 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 ZNF746Q6NUN9 644 aaPredicted RBP10.44□□□□□ -0.74
CIITA-208ENST00000572665 BLOC1S2Q6QNY1 142 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 UNC5AQ6ZN44 842 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 BEND4Q6ZU67 534 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 MFSD2AQ8NA29 543 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 FAM167AQ96KS9 214 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 PSMG3-AS1Q96PY0 264 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 PCYT2Q99447 389 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 KIF2CQ99661 725 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 ZNF577Q9BSK1 485 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 LRFN3Q9BTN0 628 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 C22orf23Q9BZE7 217 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 ZMYND12Q9H0C1 365 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 OSBPL2Q9H1P3 480 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 EPHX3Q9H6B9 360 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 AGO3Q9H9G7 860 aaKnown RBP10.44□□□□□ -0.74
CIITA-208ENST00000572665 RC3H2Q9HBD1 1191 aaKnown RBP10.44□□□□□ -0.74
CIITA-208ENST00000572665 PCDHB12Q9Y5F1 795 aa10.44□□□□□ -0.74
CIITA-208ENST00000572665 EVPLQ92817 2033 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms