RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 R3HDM2Q9Y2K5 976 aaKnown RBP11.42□□□□□ -0.58
CCDC40-207ENST00000572253 SCINQ9Y6U3 715 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 TCP10L2B9ZVM9 353 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 TP73O15350 636 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 POLGP54098 1239 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-207ENST00000572253 ASRGL1Q7L266 308 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 ECHDC2Q86YB7 292 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 ERP27Q96DN0 273 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 TRABDQ9H4I3 376 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
CCDC40-207ENST00000572253 CTDP1Q9Y5B0 961 aaPredicted RBP11.42□□□□□ -0.58
CCDC40-207ENST00000572253 SIPA1L1O43166 1804 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 FOXO6A8MYZ6 492 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 POC1B-GALNT4F8VUJ3 575 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 HNRNPDLO14979 420 aaKnown RBP11.41□□□□□ -0.58
CCDC40-207ENST00000572253 HSD17B4P51659 736 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 SEPT14Q6ZU15 432 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 KATNAL2Q8IYT4 538 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 EXD1Q8NHP7 514 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 MFSD14AQ96MC6 490 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 PWWP2AQ96N64 755 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 ADAM22Q9P0K1 906 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 ZNF148Q9UQR1 794 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 MROH7Q68CQ1 1323 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 WDR64B1ANS9 1081 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 SPAG7O75391 227 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 UNGP13051 313 aaPredicted RBP11.41□□□□□ -0.58
CCDC40-207ENST00000572253 SFNP31947 248 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 NPTX2P47972 431 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 FYB2Q5VWT5 728 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 TMEM161BQ8NDZ6 487 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 C11orf70Q9BRQ4 267 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 TAF11Q15544 211 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 PARP6Q2NL67 630 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 ERICH1Q86X53 443 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 RBM41Q96IZ5 413 aaKnown RBP11.41□□□□□ -0.58
CCDC40-207ENST00000572253 PI4K2AQ9BTU6 479 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 PHTF1Q9UMS5 762 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 TRIM33Q9UPN9 1127 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 NEU2Q9Y3R4 380 aa11.41□□□□□ -0.58
CCDC40-207ENST00000572253 A8MUI8 341 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 GRIN3BO60391 1043 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 ICAM1P05362 532 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 CA4P22748 312 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 ADSSP30520 456 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 KRT76Q01546 638 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 DNAJC3Q13217 504 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 BRDTQ58F21 947 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 PCNX4Q63HM2 1172 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 PRMT6Q96LA8 375 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 FAM118BQ9BPY3 351 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 MYLK2Q9H1R3 596 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 FBXO28Q9NVF7 368 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 UBIAD1Q9Y5Z9 338 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 DHX15O43143 795 aaKnown RBP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 DKC1O60832 514 aaKnown RBP eCLIP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 FOXN2P32314 431 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 ENPEPQ07075 957 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 PLA2G4FQ68DD2 849 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 TRABD2AQ86V40 505 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 KIRREL3Q8IZU9 778 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 DEFB129Q9H1M3 183 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 C17orf75Q9HAS0 396 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 KIAA1586Q9HCI6 787 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 ZNF219Q9P2Y4 722 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 ZNF536O15090 1300 aa11.4□□□□□ -0.58
CCDC40-207ENST00000572253 COL2A1P02458 1487 aaPredicted RBP11.4□□□□□ -0.58
CCDC40-207ENST00000572253 H0YCG3 227 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 TJP3O95049 919 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 MYCLP12524 364 aaPredicted RBP11.4□□□□□ -0.59
CCDC40-207ENST00000572253 TNNI1P19237 187 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 CD58P19256 250 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 PIK3CAP42336 1068 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 YARSP54577 528 aaKnown RBP11.4□□□□□ -0.59
CCDC40-207ENST00000572253 BZW1Q7L1Q6 419 aaKnown RBP11.4□□□□□ -0.59
CCDC40-207ENST00000572253 RCOR2Q8IZ40 523 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 ZNF526Q8TF50 670 aaPredicted RBP11.4□□□□□ -0.59
CCDC40-207ENST00000572253 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 MAML1Q92585 1016 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 INPP5DQ92835 1189 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 CNKSR1Q969H4 720 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 FAM213AQ9BRX8 229 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 KIFC3Q9BVG8 833 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 LRMDAQ9H2I8 198 aa11.4□□□□□ -0.59
CCDC40-207ENST00000572253 ASTN2O75129 1339 aaPredicted RBP11.4□□□□□ -0.59
CCDC40-207ENST00000572253 DNALI1O14645 258 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 PRPF4O43172 522 aaKnown RBP eCLIP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 CETPP11597 493 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 GARTP22102 1010 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 PAX7P23759 505 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 KLF1Q13351 362 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-207ENST00000572253 CENPUQ71F23 418 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 TDRPQ86YL5 185 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 LARGE2Q8N3Y3 721 aa11.39□□□□□ -0.59
CCDC40-207ENST00000572253 VCPIP1Q96JH7 1222 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms