RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	LEFTY2	O00292	366 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	GPR39	O43194	453 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	LMNA	P02545	664 aa	Known RBP	4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	DDX6	P26196	483 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	MALL	Q13021	153 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	MFSD14B	Q5SR56	506 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	ABHD17B	Q5VST6	288 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	ANKS6	Q68DC2	871 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	GIMAP6	Q6P9H5	292 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	KCNK18	Q7Z418	384 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	RHOT2	Q8IXI1	618 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	WDR66	Q8TBY9	1149 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	SLC9A6	Q92581	669 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	CYFIP2	Q96F07	1278 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	SERHL2	Q9H4I8	314 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	TMEM140	Q9NV12	185 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	MCM8	Q9UJA3	840 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	EID1	Q9Y6B2	187 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	IQSEC2	Q5JU85	1478 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	ARHGAP23	Q9P227	1491 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	PIK3C2B	O00750	1634 aa		4.61	□□□□□ -1.67
CDC27-213	ENST00000571643	UBR1	Q8IWV7	1749 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	CFAP65	Q6ZU64	1925 aa	Known RBP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643		K7ESF4	209 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	NDUFA10	O95299	355 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	EYA4	O95677	639 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	ALOX15	P16050	662 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	TGM1	P22735	817 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	ADSL	P30566	484 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	SREBF1	P36956	1147 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	HSPA2	P54652	639 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	SCAND1	P57086	179 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	MGAT2	Q10469	447 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	IDI1	Q13907	227 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	ATP2B3	Q16720	1220 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	ERCC6L	Q2NKX8	1250 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	SPDYE7P	Q495Y7	208 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	AGAP9	Q5VTM2	703 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643		Q6YL49	198 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	SYT12	Q8IV01	421 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	RNF169	Q8NCN4	708 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	CPEB3	Q8NE35	698 aa	Known RBP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	MANSC1	Q9H8J5	431 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	CCM2L	Q9NUG4	571 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	C14orf119	Q9NWQ9	140 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	FAM30A	Q9NZY2	134 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	SETD5	Q9C0A6	1442 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643		E9PCH4	1651 aa		4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	POLR1A	O95602	1720 aa	Predicted RBP	4.6	□□□□□ -1.67
CDC27-213	ENST00000571643	DRGX	A6NNA5	263 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	MARCH11	A6NNE9	402 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	ADCY6	O43306	1168 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	CDKL5	O76039	1030 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	FOS	P01100	380 aa	Predicted RBP	4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	HKR1	P10072	659 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	RAP2A	P10114	183 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	ALAS1	P13196	640 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	ATP5J	P18859	108 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	ZFP36	P26651	326 aa	Known RBP	4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	ADRA1B	P35368	520 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	ZEB1	P37275	1124 aa	Predicted RBP	4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	MCAM	P43121	646 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	FAM189B	P81408	668 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	COL10A1	Q03692	680 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	PDCD4	Q53EL6	469 aa	Known RBP	4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	TOR2A	Q5JU69	321 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	RPGRIP1L	Q68CZ1	1315 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	AMOTL1	Q8IY63	956 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	PQLC1	Q8N2U9	271 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	TGFBRAP1	Q8WUH2	860 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	NEURL4	Q96JN8	1562 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	RNPEP	Q9H4A4	650 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	DNAJC28	Q9NX36	388 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	DKK2	Q9UBU2	259 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	TMEM2	Q9UHN6	1383 aa		4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	USP15	Q9Y4E8	981 aa	Predicted RBP	4.59	□□□□□ -1.67
CDC27-213	ENST00000571643	SPHKAP	Q2M3C7	1700 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	TMEM131L	A2VDJ0	1609 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	SYNM	O15061	1565 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	ADGRB3	O60242	1522 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	TRPM2	O94759	1503 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	SCAF11	Q99590	1463 aa	Known RBP	4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	PIK3R4	Q99570	1358 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	PIPSL	A2A3N6	862 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	POMC	P01189	267 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	CFI	P05156	583 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	BMP5	P22003	454 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	PROZ	P22891	400 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	GUCY1A2	P33402	732 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	MTNR1B	P49286	362 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	CHN2	P52757	468 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	CCT2	P78371	535 aa	Known RBP	4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	SET	Q01105	290 aa	Predicted RBP	4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	SRSF2	Q01130	221 aa	Known RBP	4.58	□□□□□ -1.68
CDC27-213	ENST00000571643	OTUD7B	Q6GQQ9	843 aa		4.58	□□□□□ -1.68
CDC27-213	ENST00000571643		Q6ZVL8	140 aa		4.58	□□□□□ -1.68

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