RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 ANO9A1A5B4 782 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 PTGESO14684 152 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 POLR2BP30876 1174 aaKnown RBP12.81□□□□□ -0.36
CDRT1-206ENST00000571263 ADKP55263 362 aaKnown RBP12.81□□□□□ -0.36
CDRT1-206ENST00000571263 JAM2P57087 298 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 MYL6P60660 151 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 TNNC1P63316 161 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 FPGSQ05932 587 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 TUSC3Q13454 348 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 CUL2Q13617 745 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 SV2CQ496J9 727 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 NOMO2Q5JPE7 1267 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 C9orf57Q5W0N0 161 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 IQCEQ6IPM2 695 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 PDXDC1Q6P996 788 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 DPH6Q7L8W6 267 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 PPM1KQ8N3J5 372 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 GSTCDQ8NEC7 633 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 HELQQ8TDG4 1101 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 BAP1Q92560 729 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 LPPQ93052 612 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 FAM193BQ96PV7 902 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-206ENST00000571263 BAG1Q99933 345 aaPredicted RBP12.81□□□□□ -0.36
CDRT1-206ENST00000571263 NIF3L1Q9GZT8 377 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 MTIF3Q9H2K0 278 aaKnown RBP12.81□□□□□ -0.36
CDRT1-206ENST00000571263 NLRC4Q9NPP4 1024 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 SIX4Q9UIU6 781 aa12.81□□□□□ -0.36
CDRT1-206ENST00000571263 CITO14578 2027 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-206ENST00000571263 CLSTN1O94985 981 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 FGBP02675 491 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 SERPING1P05155 500 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 CSF2RAP15509 400 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 FECHP22830 423 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 ANXA13P27216 316 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 SOX5P35711 763 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 TAF6P49848 677 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 LRMPQ12912 555 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 RAPGEF1Q13905 1077 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 DRAP1Q14919 205 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-206ENST00000571263 PTPN21Q16825 1174 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 WDR72Q3MJ13 1102 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 GLRA4Q5JXX5 417 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 PSRC1Q6PGN9 363 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-206ENST00000571263 CYP26C1Q6V0L0 522 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 VPS36Q86VN1 386 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 CRIPAKQ8N1N5 446 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 CXorf38Q8TB03 319 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 LBHD1Q9BQE6 289 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-206ENST00000571263 XYLT2Q9H1B5 865 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 NR2E3Q9Y5X4 410 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 FHOD1Q9Y613 1164 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 PCNTO95613 3336 aa12.8□□□□□ -0.36
CDRT1-206ENST00000571263 ANK1P16157 1881 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 LRRC53A6NM62 1247 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 F8VZ95 297 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 EPHB6O15197 1021 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 ARHGAP6O43182 974 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 GFPT2O94808 682 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 PRKCIP41743 596 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 KCNJ6P48051 423 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 SCNN1GP51170 649 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 ASIC2Q16515 512 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 MEA1Q16626 185 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 DCLRE1AQ6PJP8 1040 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 SPATA18Q8TC71 538 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 SHC3Q92529 594 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 TATDN2Q93075 761 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 TOP1MTQ969P6 601 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 ZFP42Q96MM3 310 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 TMEM175Q9BSA9 504 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 PI4K2AQ9BTU6 479 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 MIOSQ9NXC5 875 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 GDAP2Q9NXN4 497 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 KIAA1257Q9ULG3 409 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 CNTN6Q9UQ52 1028 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 NUB1Q9Y5A7 615 aa12.79□□□□□ -0.36
CDRT1-206ENST00000571263 SSU72P8A0A1W2PR75 194 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 CCDC85CA6NKD9 419 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 MEIS3P2A8K0S8 358 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 KPNA7A9QM74 516 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 RNF225M0QZC1 329 aaPredicted RBP12.78□□□□□ -0.36
CDRT1-206ENST00000571263 ALDH2P05091 517 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 SKILP12757 684 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 ITGB8P26012 769 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 CYLC1P35663 651 aaPredicted RBP12.78□□□□□ -0.36
CDRT1-206ENST00000571263 PTK2Q05397 1052 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
CDRT1-206ENST00000571263 NAB2Q15742 525 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 ARHGAP44Q17R89 818 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 COL13A1Q5TAT6 717 aaPredicted RBP12.78□□□□□ -0.36
CDRT1-206ENST00000571263 ARHGEF19Q8IW93 802 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 FAM71AQ8IYT1 594 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 C7orf61Q8IZ16 206 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 TXLNBQ8N3L3 684 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 DPF3Q92784 378 aa12.78□□□□□ -0.36
CDRT1-206ENST00000571263 C18orf25Q96B23 403 aaPredicted RBP12.78□□□□□ -0.36
CDRT1-206ENST00000571263 BCO2Q9BYV7 579 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms