RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 MAPK4P31152 587 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 SREBF1P36956 1147 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 CTC1Q2NKJ3 1217 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 EPC2Q52LR7 807 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 ODR4Q5SWX8 454 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 MMADHCQ9H3L0 296 aaPredicted RBP16.34■□□□□ 0.21
SMG6-207ENST00000570756 NPHS2Q9NP85 383 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 IRAK4Q9NWZ3 460 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 STX18Q9P2W9 335 aaKnown RBP16.34■□□□□ 0.21
SMG6-207ENST00000570756 ZNF212Q9UDV6 495 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 GRID1Q9ULK0 1009 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 NEU2Q9Y3R4 380 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 FAM196BA6NMK8 535 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 GYG2O15488 501 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 HAUS5O94927 633 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 PSMG1O95456 288 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 POLD1P28340 1107 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 SLC1A1P43005 524 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 VAMP7P51809 220 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 FMO1Q01740 532 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 DSTYKQ6XUX3 929 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 PRUNE1Q86TP1 453 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 B4GALNT2Q8NHY0 566 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 ZNF75CPQ92670 426 aaPredicted RBP16.34■□□□□ 0.21
SMG6-207ENST00000570756 FIZ1Q96SL8 496 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 DMAP1Q9NPF5 467 aaPredicted RBP16.34■□□□□ 0.21
SMG6-207ENST00000570756 KCND2Q9NZV8 630 aa16.34■□□□□ 0.21
SMG6-207ENST00000570756 GAKO14976 1311 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 POC1B-GALNT4F8VUJ3 575 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 CIITAP33076 1130 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 CCNG2Q16589 344 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 ACSBG2Q5FVE4 666 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.33■□□□□ 0.2
SMG6-207ENST00000570756 ANKS1BQ7Z6G8 1248 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 C4orf33Q8N1A6 199 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 VPS52Q8N1B4 723 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 ARHGAP24Q8N264 748 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 NRG4Q8WWG1 115 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 GATA6Q92908 595 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 NR1H4Q96RI1 486 aaPredicted RBP16.33■□□□□ 0.2
SMG6-207ENST00000570756 ZNF184Q99676 751 aaPredicted RBP16.33■□□□□ 0.2
SMG6-207ENST00000570756 EPAS1Q99814 870 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 CCDC28BQ9BUN5 200 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 SAYSD1Q9NPB0 183 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 ANAPC7Q9UJX3 599 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 EML1O00423 815 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 PLSCR1O15162 318 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 GSC2O15499 205 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 CYP26A1O43174 497 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 KRT36O76013 467 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 GCAP28676 217 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 MFAP3P55082 362 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 SEPT7Q16181 437 aaKnown RBP16.33■□□□□ 0.2
SMG6-207ENST00000570756 PKN2Q16513 984 aaKnown RBP16.33■□□□□ 0.2
SMG6-207ENST00000570756 C15orf52Q6ZUT6 534 aaKnown RBP16.33■□□□□ 0.2
SMG6-207ENST00000570756 SLC47A2Q86VL8 602 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 TPH2Q8IWU9 490 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 PTPRN2Q92932 1015 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 NSL1Q96IY1 281 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 FAM81BQ96LP2 452 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 HSD17B14Q9BPX1 270 aa16.33■□□□□ 0.2
SMG6-207ENST00000570756 SSU72Q9NP77 194 aaKnown RBP16.33■□□□□ 0.2
SMG6-207ENST00000570756 SRP68Q9UHB9 627 aaKnown RBP16.33■□□□□ 0.2
SMG6-207ENST00000570756 FOCADQ5VW36 1801 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 A8MXQ7 604 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 ZNF76P36508 570 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 DLG4P78352 724 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 SLC1A5Q15758 541 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 DAB2IPQ5VWQ8 1189 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 FOXB2Q5VYV0 432 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 PHC3Q8NDX5 983 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 SLC5A5Q92911 643 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 VCX3BQ9H321 246 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 VCX3AQ9NNX9 186 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 SERPINB13Q9UIV8 391 aa16.32■□□□□ 0.2
SMG6-207ENST00000570756 PIK3CDO00329 1044 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 TYROBPO43914 113 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 TM4SF1P30408 202 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 GCLMP48507 274 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 PPP3CAQ08209 521 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 PICALMQ13492 652 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 RASA2Q15283 850 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 LRRC23Q53EV4 343 aaPredicted RBP16.31■□□□□ 0.2
SMG6-207ENST00000570756 ACAD10Q6JQN1 1059 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 LVRNQ6Q4G3 990 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 GSTA5Q7RTV2 222 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 SDCCAG8Q86SQ7 713 aaPredicted RBP16.31■□□□□ 0.2
SMG6-207ENST00000570756 PTCD3Q96EY7 689 aaKnown RBP16.31■□□□□ 0.2
SMG6-207ENST00000570756 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 SLC24A2Q9UI40 661 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 R3HDM2Q9Y2K5 976 aaKnown RBP16.31■□□□□ 0.2
SMG6-207ENST00000570756 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 TBX10O75333 385 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 PLS3P13797 630 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 CYP11B1P15538 503 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 CETN2P41208 172 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 SERPINB4P48594 390 aa16.31■□□□□ 0.2
SMG6-207ENST00000570756 MXI1P50539 228 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms