RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 TRPV4Q9HBA0 871 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 UBN1Q9NPG3 1134 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 HPS4Q9NQG7 708 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 RBM28Q9NW13 759 aaKnown RBP7.99□□□□□ -1.13
SMG6-205ENST00000570659 ASXL3Q9C0F0 2248 aa7.99□□□□□ -1.13
SMG6-205ENST00000570659 HELZP42694 1942 aaKnown RBP7.98□□□□□ -1.13
SMG6-205ENST00000570659 A0A1W2PRU2 124 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 BCLAF3A2AJT9 711 aaKnown RBP7.98□□□□□ -1.13
SMG6-205ENST00000570659 hCG_1984214I3L0E3 225 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 KALRNO60229 2985 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 YWHABP31946 246 aaKnown RBP7.98□□□□□ -1.13
SMG6-205ENST00000570659 QARSP47897 775 aaKnown RBP7.98□□□□□ -1.13
SMG6-205ENST00000570659 CDC42EP1Q00587 391 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 CREB5Q02930 508 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 TWF1Q12792 350 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 INF2Q27J81 1249 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 XKR9Q5GH70 373 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 TRIM68Q6AZZ1 485 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 SLC8B1Q6J4K2 584 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 SLC27A1Q6PCB7 646 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 RNF19BQ6ZMZ0 732 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 GAREM2Q75VX8 874 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 MAEAQ7L5Y9 396 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 CACNA2D4Q7Z3S7 1137 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 PROSER1Q86XN7 944 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 SFTPA1Q8IWL2 248 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 CHCHD4Q8N4Q1 142 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 ZNF713Q8N859 430 aaPredicted RBP7.98□□□□□ -1.13
SMG6-205ENST00000570659 CNNM3Q8NE01 707 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 RDM1Q8NG50 284 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 LOXL4Q96JB6 756 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 IER2Q9BTL4 223 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 KIFC3Q9BVG8 833 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 CYP4F11Q9HBI6 524 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 C6orf50Q9HD87 102 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 KCNMB3Q9NPA1 279 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 TMEM74BQ9NUR3 256 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 FBXL5Q9UKA1 691 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 GDAQ9Y2T3 454 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 BACE2Q9Y5Z0 518 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 PCDH15Q96QU1 1955 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 GON4LQ3T8J9 2241 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 OBSL1O75147 1896 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 ANK1P16157 1881 aa7.98□□□□□ -1.13
SMG6-205ENST00000570659 PRPF3O43395 683 aaKnown RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 B3GAT3O94766 335 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 CAVIN2O95810 425 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 CCDC192P0DO97 292 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 CHRM1P11229 460 aaPredicted RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 ARSAP15289 507 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 USP11P51784 963 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 KPNA1P52294 538 aaPredicted RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 CREMQ03060 361 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 PPP2R5CQ13362 524 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 MRPL58Q14197 206 aaKnown RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 UPP1Q16831 310 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 UAP1L1Q3KQV9 507 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 ARID3BQ8IVW6 561 aaPredicted RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 TCEAL8Q8IYN2 117 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 STKLD1Q8NE28 680 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 ZNF461Q8TAF7 563 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 OXER1Q8TDS5 423 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 SLC7A3Q8WY07 619 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 C18orf25Q96B23 403 aaPredicted RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 CCDC51Q96ER9 411 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 TMEM209Q96SK2 561 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 MTRQ99707 1265 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 ESYT1Q9BSJ8 1104 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 CCDC113Q9H0I3 377 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 POLR3FQ9H1D9 316 aaPredicted RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 VPS45Q9NRW7 570 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 CACNA2D2Q9NY47 1150 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 CCL26Q9Y258 94 aa7.97□□□□□ -1.13
SMG6-205ENST00000570659 ATXN2Q99700 1313 aaKnown RBP7.97□□□□□ -1.13
SMG6-205ENST00000570659 TMEM8BA6NDV4 472 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 TMEM189-UBE2V1I3L0A0 370 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 PRRG1O14668 218 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 CHADO15335 359 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 RNF40O75150 1001 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 NR1I2O75469 434 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 SLITRK3O94933 977 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 LRG1P02750 347 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 THP07101 528 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 CEACAM1P13688 526 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 ATF2P15336 505 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 CSRP1P21291 193 aaKnown RBP7.96□□□□□ -1.14
SMG6-205ENST00000570659 AXLP30530 894 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 RFC5P40937 340 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 CYP4F8P98187 520 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 MESP2Q0VG99 397 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 SCAPQ12770 1279 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 TMEM196Q5HYL7 178 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 NT5DC1Q5TFE4 455 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 PDZD4Q76G19 769 aaPredicted RBP7.96□□□□□ -1.14
SMG6-205ENST00000570659 PIP4P1Q86T03 277 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 POTEDQ86YR6 584 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 TEX2Q8IWB9 1127 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 C4orf19Q8IY42 314 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 MDM1Q8TC05 714 aa7.96□□□□□ -1.14
SMG6-205ENST00000570659 PIGOQ8TEQ8 1089 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms