RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 EIF3DO15371 548 aaKnown RBP eCLIP10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 TGM5O43548 720 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 TBC1D4O60343 1298 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 RHOBTB3O94955 611 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 CST3P01034 146 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 URODP06132 367 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 GARTP22102 1010 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 LRPAP1P30533 357 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 OR1D2P34982 312 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 TJAP1Q5JTD0 557 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 C1orf220Q5T0J3 134 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 PDE12Q6L8Q7 609 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 KIAA1841Q6NSI8 718 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 POTEHQ6S545 545 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 TMEM184AQ6ZMB5 413 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 APBB1IPQ7Z5R6 666 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 BRSK2Q8IWQ3 736 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 C1orf127Q8N9H9 656 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 CCDC127Q96BQ5 260 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 IPO9Q96P70 1041 aaKnown RBP10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 RTP3Q9BQQ7 232 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 DMAC2Q9NW81 257 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 RBAKQ9NYW8 714 aaPredicted RBP10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 USP25Q9UHP3 1055 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 MAN1B1Q9UKM7 699 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 IRAK3Q9Y616 596 aa10.64□□□□□ -0.71
GTF3C1-212ENST00000570129 SF3B1O75533 1304 aaKnown RBP eCLIP10.63□□□□□ -0.715e-6■■■■■ 86.9
GTF3C1-212ENST00000570129 TDRD15B5MCY1 1934 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 SEC24AO95486 1093 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 POLR2BP30876 1174 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 PRCPP42785 496 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 LILRA4P59901 499 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 NTHL1P78549 312 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 MRPL58Q14197 206 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 PSMD5Q16401 504 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 VARS2Q5ST30 1063 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 GPD1LQ8N335 351 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 TMEM87AQ8NBN3 555 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 PIK3R5Q8WYR1 880 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 ZNF707Q96C28 371 aaPredicted RBP10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 SUSD3Q96L08 255 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 SENP8Q96LD8 212 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 FBXL18Q96ME1 805 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 MTMR12Q9C0I1 747 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 CRISPLD1Q9H336 500 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 TMEM206Q9H813 350 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 MAN1C1Q9NR34 630 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 LMBRD1Q9NUN5 540 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 UBQLN1Q9UMX0 589 aaKnown RBP10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 AGAP1Q9UPQ3 857 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 NME7Q9Y5B8 376 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 CDY1Q9Y6F8 540 aa10.63□□□□□ -0.71
GTF3C1-212ENST00000570129 TRIM49BA6NDI0 452 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 TMEM189-UBE2V1I3L0A0 370 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 SOAT2O75908 522 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 ITGB3P05106 788 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 DLATP10515 647 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 RPL9P32969 192 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 MCM4P33991 863 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 CYP24A1Q07973 514 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 ALCAMQ13740 583 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 SNRNP35Q16560 246 aaKnown RBP10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 WSCD1Q658N2 575 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 LRRTM3Q86VH5 581 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 OSTM1Q86WC4 334 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 CSGALNACT2Q8N6G5 542 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 TTC9BQ8N6N2 239 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 SMRP1Q8NCR6 262 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 BEST2Q8NFU1 509 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 SPATA20Q8TB22 786 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 SUSD6Q92537 303 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 MFSD14AQ96MC6 490 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 UROC1Q96N76 676 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 MED15Q96RN5 788 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 UHRF1Q96T88 793 aaPredicted RBP10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 ADAM7Q9H2U9 754 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 SMOC2Q9H3U7 446 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 POMKQ9H5K3 350 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 SLC38A7Q9NVC3 462 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 INTS13Q9NVM9 706 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 NUB1Q9Y5A7 615 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 VWA8A3KMH1 1905 aa10.62□□□□□ -0.71
GTF3C1-212ENST00000570129 CCDC195A0A1B0GUA6 201 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 ZNF233A6NK53 670 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 LRRIQ3A6PVS8 624 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 PPP1R3GB7ZBB8 358 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 N4BP1O75113 896 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 VNN1O95497 513 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 NR3C1P04150 777 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 CYP3A5P20815 502 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 SCP2P22307 547 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 AARSP49588 968 aaKnown RBP eCLIP10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 PSMD2Q13200 908 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 KCNB1Q14721 858 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 ZCWPW2Q504Y3 356 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 ANKRD40Q6AI12 368 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 DSTYKQ6XUX3 929 aa10.61□□□□□ -0.71
GTF3C1-212ENST00000570129 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms