RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 NIF3L1Q9GZT8 377 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 GRHL1Q9NZI5 618 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 AMACRQ9UHK6 382 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 PNMA3Q9UL41 463 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 TNFSF13BQ9Y275 285 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 DERAQ9Y315 318 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 SCN4AP35499 1836 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 MYO1FO00160 1098 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 VNN1O95497 513 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 ERBB2P04626 1255 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 MCF2P10911 925 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 PIGHQ14442 188 aaPredicted RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 PTGISQ16647 500 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 MTERF2Q49AM1 385 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 CEP85LQ5SZL2 805 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 CCDC137Q6PK04 289 aaKnown RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 ATL2Q8NHH9 583 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 SERPINB12Q96P63 405 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 ACO2Q99798 780 aaKnown RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 AP1M1Q9BXS5 423 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 FETUBQ9UGM5 382 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 A0A087WUV0 522 aaPredicted RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 DAPK3O43293 454 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 FAM189A1O60320 539 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 CNMDO75829 334 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 POLR2BP30876 1174 aaKnown RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 CALCOCO2Q13137 446 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 MPZL3Q6UWV2 235 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 ZDHHC24Q6UX98 284 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 TAOK1Q7L7X3 1001 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 ZNF516Q92618 1163 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 ZKSCAN4Q969J2 545 aaPredicted RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 ARL8AQ96BM9 186 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 TTC25Q96NG3 672 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 PCYT2Q99447 389 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 FZD8Q9H461 694 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 VTA1Q9NP79 307 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 PRMT7Q9NVM4 692 aaPredicted RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 CPSF3Q9UKF6 684 aaKnown RBP8.39□□□□□ -1.07
LINC00559-201ENST00000569476 BCS1LQ9Y276 419 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 CEP83Q9Y592 693 aa8.39□□□□□ -1.07
LINC00559-201ENST00000569476 MROH7Q68CQ1 1323 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 GOLGA8IPA6NC78 632 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 GOLGA8JA6NMD2 632 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ZNF487B1APH4 448 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ACKR2O00590 384 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 TNNC2P02585 160 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ITGA4P13612 1032 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 KRT5P13647 590 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 P4HA1P13674 534 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 MAGEA9P43362 315 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 IRX3P78415 501 aaPredicted RBP8.38□□□□□ -1.07
LINC00559-201ENST00000569476 DHX9Q08211 1270 aaKnown RBP8.38□□□□□ -1.07
LINC00559-201ENST00000569476 CAPSQ13938 189 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 MESDQ14696 234 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 DUOXA2Q1HG44 320 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 TRPM4Q8TD43 1214 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 DDX27Q96GQ7 796 aaKnown RBP8.38□□□□□ -1.07
LINC00559-201ENST00000569476 DCLK3Q9C098 648 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 PTPRHQ9HD43 1115 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 RRP15Q9Y3B9 282 aaKnown RBP8.38□□□□□ -1.07
LINC00559-201ENST00000569476 SOWAHBA6NEL2 793 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 SOCS7O14512 581 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 FAM107AO95990 144 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 TNNI1P19237 187 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 VGLL4Q14135 290 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 RHBDF2Q6PJF5 856 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 MAEAQ7L5Y9 396 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 PALB2Q86YC2 1186 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 CCDC89Q8N998 374 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 TTC13Q8NBP0 860 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 RBBP8NLQ8NC74 664 aaPredicted RBP8.38□□□□□ -1.07
LINC00559-201ENST00000569476 TMEM35BQ8NCS4 154 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 FEZF2Q8TBJ5 459 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 USP6NLQ92738 828 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ANKRD36BP1Q96IX9 119 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 PLCD4Q9BRC7 762 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 TRAIPQ9BWF2 469 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 IKZF4Q9H2S9 585 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ASB7Q9H672 318 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ERICH4A6NGS2 130 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 TISP43B9A030 160 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 MSCO60682 206 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 GNA15P30679 374 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 USP8P40818 1118 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 GUCY2FP51841 1108 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 SLC18A1P54219 525 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 NOP14P78316 857 aaKnown RBP8.38□□□□□ -1.07
LINC00559-201ENST00000569476 MAPK6Q16659 721 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 PCGF5Q86SE9 256 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 PPM1EQ8WY54 764 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 WNK4Q96J92 1243 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 GPR20Q99678 358 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ACTR5Q9H9F9 607 aaPredicted RBP8.38□□□□□ -1.07
LINC00559-201ENST00000569476 LGALS13Q9UHV8 139 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 SLC12A6Q9UHW9 1150 aa8.38□□□□□ -1.07
LINC00559-201ENST00000569476 ZHX1Q9UKY1 873 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms