RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 HP1BP3Q5SSJ5 553 aaPredicted RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 CPLX4Q7Z7G2 160 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 TAB3Q8N5C8 712 aaPredicted RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 KLRG1Q96E93 195 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 FBXL18Q96ME1 805 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 HOXC10Q9NYD6 342 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 R3HDM2Q9Y2K5 976 aaKnown RBP9.33□□□□□ -0.92
LINC00558-201ENST00000569422 MROH7Q68CQ1 1323 aa9.33□□□□□ -0.92
LINC00558-201ENST00000569422 MAPK13O15264 365 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PPFIA2O75334 1257 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 VNN1O95497 513 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 GARTP22102 1010 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 RPS12P25398 132 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CTNNA2P26232 953 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 MAGEA9P43362 315 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 SNRPFP62306 86 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 GHRHRQ02643 423 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 LONRF1Q17RB8 773 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 FAM182AQ5T1J6 154 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CAPN12Q6ZSI9 719 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 THNSL1Q8IYQ7 743 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 TRAPPC12Q8WVT3 735 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PSPC1Q8WXF1 523 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CD101Q93033 1021 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CDHR1Q96JP9 859 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PABPC3Q9H361 631 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 UVRAGQ9P2Y5 699 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PCDHB2Q9Y5E7 798 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 KLHL33A6NCF5 533 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 WEE2P0C1S8 567 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 RALAP11233 206 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 KRT10P13645 584 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 ATF7P17544 494 aaPredicted RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 ADCY8P40145 1251 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 HIRAP54198 1017 aaPredicted RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 TFAMQ00059 246 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 ORC1Q13415 861 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 R3HDM1Q15032 1099 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 LRRC14Q15048 493 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PPP2R5EQ16537 467 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 FBXW10Q5XX13 1052 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CRELD2Q6UXH1 353 aaPredicted RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 MOB2Q70IA6 237 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 DPH6Q7L8W6 267 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 GSTA5Q7RTV2 222 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PACS2Q86VP3 889 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 RBBP8NLQ8NC74 664 aaPredicted RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 RDM1Q8NG50 284 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PRPF31Q8WWY3 499 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 SEC14L1Q92503 715 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 RAPGEF5Q92565 580 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 MRRFQ96E11 262 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 EPB41L4BQ9H329 900 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 C17orf75Q9HAS0 396 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 BTBD7Q9P203 1132 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 TBK1Q9UHD2 729 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CAPN7Q9Y6W3 813 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PASKQ96RG2 1323 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 ZNF646O15015 1829 aaPredicted RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 MYPNQ86TC9 1320 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 GMNCA6NCL1 334 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PODXLO00592 558 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 TLR3O15455 904 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 GGPS1O95749 300 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 C4BPAP04003 597 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 UBA1P22314 1058 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CHKAP35790 457 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 TCF7P36402 384 aaPredicted RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 STAT5BP51692 787 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 TAS2R40P59535 323 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 NOP14P78316 857 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 IGBP1P78318 339 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 CUL2Q13617 745 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 ZACNQ401N2 412 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 MFSD4BQ5TF39 518 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 EIF1ADQ8N9N8 165 aaKnown RBP9.32□□□□□ -0.92
LINC00558-201ENST00000569422 NLRP4Q96MN2 994 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 ADAM33Q9BZ11 813 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 MTMR12Q9C0I1 747 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 PDLIM7Q9NR12 457 aa9.32□□□□□ -0.92
LINC00558-201ENST00000569422 ATP8B3O60423 1300 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 C19orf81C9J6K1 198 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 KRT19P08727 400 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 FDX1P10109 184 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 UNGP13051 313 aaPredicted RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 CHN1P15882 459 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 TCF4P15884 667 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 PSMC4P43686 418 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 HADHBP55084 474 aaKnown RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 RPL7AP62424 266 aaKnown RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 GCNT1Q02742 428 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 MTM1Q13496 603 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 NCOA4Q13772 614 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 VGLL4Q14135 290 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 TTLL12Q14166 644 aaPredicted RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 TTC31Q49AM3 519 aaPredicted RBP9.31□□□□□ -0.92
LINC00558-201ENST00000569422 C4orf46Q504U0 113 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 XRRA1Q6P2D8 792 aa9.31□□□□□ -0.92
LINC00558-201ENST00000569422 B4GALNT4Q76KP1 1039 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms