RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 FBXL18Q96ME1 805 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 NECTIN4Q96NY8 510 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 KLHL5Q96PQ7 755 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 FAM213AQ9BRX8 229 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 FGFBP2Q9BYJ0 223 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 KIAA1586Q9HCI6 787 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 RBAKQ9NYW8 714 aaPredicted RBP10.65□□□□□ -0.7
CLN6-209ENST00000569336 CHMP5Q9NZZ3 219 aa10.65□□□□□ -0.7
CLN6-209ENST00000569336 MEFVO15553 781 aaPredicted RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 EXTL3O43909 919 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 ZNF202O95125 648 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 RPN1P04843 607 aaKnown RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 NFICP08651 508 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 EPCAMP16422 314 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 CASP1P29466 404 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 ADSSP30520 456 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 MTHFRP42898 656 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 MRE11P49959 708 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 CBX2Q14781 532 aaPredicted RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 SURF1Q15526 300 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 ZBTB6Q15916 424 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 SPATA1Q5VX52 437 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 TAS1R1Q7RTX1 841 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 ADHFE1Q8IWW8 467 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 C3orf58Q8NDZ4 430 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 GLIS3Q8NEA6 775 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 APPL2Q8NEU8 664 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 NOC3LQ8WTT2 800 aaKnown RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 HDAC7Q8WUI4 952 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 CACTINQ8WUQ7 758 aaKnown RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 SAAL1Q96ER3 474 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 SUSD3Q96L08 255 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 B3GALT6Q96L58 329 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 RIPOR3Q96MK2 946 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 ZNF560Q96MR9 790 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 CBWD1Q9BRT8 395 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 OXCT2Q9BYC2 517 aaPredicted RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 GOLPH3LQ9H4A5 285 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 PLEKHA4Q9H4M7 779 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 SLC39A2Q9NP94 309 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 MAN1C1Q9NR34 630 aa10.64□□□□□ -0.71
CLN6-209ENST00000569336 USP15Q9Y4E8 981 aaPredicted RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 KIF26AQ9ULI4 1882 aaPredicted RBP10.64□□□□□ -0.71
CLN6-209ENST00000569336 ZNF233A6NK53 670 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 H7C4K7 107 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 KLRC4O43908 158 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 ODC1P11926 461 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 TKTP29401 623 aaKnown RBP10.63□□□□□ -0.71
CLN6-209ENST00000569336 SSTR3P32745 418 aaPredicted RBP10.63□□□□□ -0.71
CLN6-209ENST00000569336 PNPLA4P41247 253 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 ZP2Q05996 745 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 SPAG1Q07617 926 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 KNOP1Q1ED39 458 aaKnown RBP10.63□□□□□ -0.71
CLN6-209ENST00000569336 KMT5BQ4FZB7 885 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 LIN9Q5TKA1 542 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 ZNF280DQ6N043 979 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 SYCE2Q6PIF2 218 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 PRSS55Q6UWB4 352 aaPredicted RBP10.63□□□□□ -0.71
CLN6-209ENST00000569336 CRELD2Q6UXH1 353 aaPredicted RBP10.63□□□□□ -0.71
CLN6-209ENST00000569336 CYP26C1Q6V0L0 522 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 C15orf39Q6ZRI6 1047 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 SCFD1Q8WVM8 642 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 IKZF4Q9H2S9 585 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 ADAM7Q9H2U9 754 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 AGPAT3Q9NRZ7 376 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 RMND1Q9NWS8 449 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 HSPBP1Q9NZL4 362 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 MTRRQ9UBK8 725 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 PCDHB8Q9UN66 801 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 R3HCC1Q9Y3T6 440 aaKnown RBP10.63□□□□□ -0.71
CLN6-209ENST00000569336 BACE2Q9Y5Z0 518 aa10.63□□□□□ -0.71
CLN6-209ENST00000569336 FAM86C2PA6NEL3 165 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 I3L4J1 428 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 M0QZQ0 153 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 KINO60870 393 aaKnown RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 RHOBTB3O94955 611 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 TMEM191BP0C7N4 346 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 BRCC3P46736 316 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 DPYDQ12882 1025 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 KCNB1Q14721 858 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 SNRNP35Q16560 246 aaKnown RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 SV2CQ496J9 727 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 VARS2Q5ST30 1063 aaKnown RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 RARS2Q5T160 578 aaKnown RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 USP37Q86T82 979 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 GLYCTKQ8IVS8 523 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 NELFCDQ8IXH7 590 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 C12orf56Q8IXR9 622 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 FMR1NBQ8N0W7 255 aaPredicted RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 XXYLT1Q8NBI6 393 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 KIAA0895Q8NCT3 520 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 CMASQ8NFW8 434 aaPredicted RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 LNX1Q8TBB1 728 aaPredicted RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 SUSD6Q92537 303 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 TIGD1Q96MW7 591 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 PHF7Q9BWX1 381 aaPredicted RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 RHOBTB2Q9BYZ6 727 aa10.62□□□□□ -0.71
CLN6-209ENST00000569336 GTPBP4Q9BZE4 634 aaKnown RBP10.62□□□□□ -0.71
CLN6-209ENST00000569336 PCIF1Q9H4Z3 704 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms