RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 URODP06132 367 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 POLR2BP30876 1174 aaKnown RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 TAF6P49848 677 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 GUCY2FP51841 1108 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 MCCD1P59942 119 aaPredicted RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 MYL5Q02045 173 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 CREMQ03060 361 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 USP41Q3LFD5 358 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 SV2CQ496J9 727 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 ANO6Q4KMQ2 910 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 PDXDC1Q6P996 788 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 C11orf57Q6ZUT1 292 aaPredicted RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 VPS52Q8N1B4 723 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 MICAL1Q8TDZ2 1067 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 HASPINQ8TF76 798 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 BCL7CQ8WUZ0 217 aaPredicted RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 PPP2R3CQ969Q6 453 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 MRPL38Q96DV4 380 aaKnown RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 BORCS6Q96GS4 357 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 BPIFA3Q9BQP9 254 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 HERC2P3Q9BVR0 1158 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 ENTPD7Q9NQZ7 604 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 CACNG4Q9UBN1 327 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 AGAP1Q9UPQ3 857 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 NFE2L3Q9Y4A8 694 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 N4BP1O75113 896 aaKnown RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 CLSTN1O94985 981 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 TRIM49P0CI25 452 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 TRIM49CP0CI26 452 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 ATICP31939 592 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 GLUD2P49448 558 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 MARSP56192 900 aaKnown RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 DLG4P78352 724 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 CETN1Q12798 172 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 SMC1AQ14683 1233 aaKnown RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 TIGD5Q53EQ6 642 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 FAM171A1Q5VUB5 890 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 KRT39Q6A163 491 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 DSTYKQ6XUX3 929 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 TMC7Q7Z402 723 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 GPR65Q8IYL9 337 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 CCDC150Q8NCX0 1101 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 APPL2Q8NEU8 664 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 ANKRD20A12PQ8NF67 263 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 PLEKHO2Q8TD55 490 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 CNOT6LQ96LI5 555 aaKnown RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 MED15Q96RN5 788 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 TCF25Q9BQ70 676 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 IMPG2Q9BZV3 1241 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 GZF1Q9H116 711 aaPredicted RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 TMEM8AQ9HCN3 771 aa9.83□□□□□ -0.84
CHD9-219ENST00000569225 MRPL17Q9NRX2 175 aaKnown RBP9.83□□□□□ -0.84
CHD9-219ENST00000569225 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.83□□□□□ -0.84
CHD9-219ENST00000569225 CHD9Q3L8U1 2897 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 FNDC1Q4ZHG4 1894 aaPredicted RBP9.82□□□□□ -0.84
CHD9-219ENST00000569225 SMTNL1A8MU46 457 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 F8W810 466 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 RFXAPO00287 272 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 SYN3O14994 580 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 TPM2P07951 284 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 CTSAP10619 480 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 ODC1P11926 461 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 EEF1GP26641 437 aaKnown RBP9.82□□□□□ -0.84
CHD9-219ENST00000569225 MTIF2P46199 727 aaKnown RBP9.82□□□□□ -0.84
CHD9-219ENST00000569225 GCLMP48507 274 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 ZNF165P49910 485 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 MXI1P50539 228 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 LILRA4P59901 499 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 NCOA4Q13772 614 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 ZACNQ401N2 412 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 TDRD10Q5VZ19 366 aaKnown RBP9.82□□□□□ -0.84
CHD9-219ENST00000569225 SV2AQ7L0J3 742 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 Q7L0L9 218 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 CREBRFQ8IUR6 639 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 TRIM59Q8IWR1 403 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 C3orf58Q8NDZ4 430 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 ZNF516Q92618 1163 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 TAF4BQ92750 862 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 SLC35C1Q96A29 364 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 HPDLQ96IR7 371 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 SUSD3Q96L08 255 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 TTPALQ9BTX7 342 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 FUCA2Q9BTY2 467 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 GPR62Q9BZJ7 368 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 ZBP1Q9H171 429 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD9-219ENST00000569225 SIX4Q9UIU6 781 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 DSEQ9UL01 958 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 PCDHB8Q9UN66 801 aa9.82□□□□□ -0.84
CHD9-219ENST00000569225 FSD2A1L4K1 749 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 BECN2A8MW95 431 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 KPNA7A9QM74 516 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 PPEF2O14830 753 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 STAU1O95793 577 aaKnown RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 EFEMP2O95967 443 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 C4BPAP04003 597 aaKnown RBP9.81□□□□□ -0.84
CHD9-219ENST00000569225 P4HA1P13674 534 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 FOSL2P15408 326 aa9.81□□□□□ -0.84
CHD9-219ENST00000569225 POU3F3P20264 500 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms