RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 PRCPP42785 496 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 ARPP19P56211 112 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 MRPS5P82675 430 aaKnown RBP13.85□□□□□ -0.19
CDT1-203ENST00000569140 CYP24A1Q07973 514 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 ADAM15Q13444 863 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 ZBTB6Q15916 424 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 C9orf57Q5W0N0 161 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 KLHL10Q6JEL2 608 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 PDXDC1Q6P996 788 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 CLEC17AQ6ZS10 378 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 PPFIBP1Q86W92 1011 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 NT5DC4Q86YG4 428 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 C12orf56Q8IXR9 622 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 ELOA2Q8IYF1 753 aaPredicted RBP13.85□□□□□ -0.19
CDT1-203ENST00000569140 CSGALNACT2Q8N6G5 542 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 CASP10Q92851 521 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 ZNF560Q96MR9 790 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
CDT1-203ENST00000569140 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.85□□□□□ -0.19
CDT1-203ENST00000569140 LMBRD1Q9NUN5 540 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 HCFC2Q9Y5Z7 792 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 EYSQ5T1H1 3165 aa13.85□□□□□ -0.19
CDT1-203ENST00000569140 PSMA7O14818 248 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 GLP2RO95838 553 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 GLUD1P00367 558 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 EPCAMP16422 314 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 RPL13P26373 211 aaKnown RBP13.84□□□□□ -0.19
CDT1-203ENST00000569140 POLR2BP30876 1174 aaKnown RBP13.84□□□□□ -0.19
CDT1-203ENST00000569140 KCNQ1P51787 676 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 DLX2Q07687 328 aaPredicted RBP13.84□□□□□ -0.19
CDT1-203ENST00000569140 BFSP1Q12934 665 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 CD300LGQ6UXG3 332 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 ANKS3Q6ZW76 656 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 USP37Q86T82 979 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 WDR49Q8IV35 697 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 VN1R2Q8NFZ6 395 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 ATXN2LQ8WWM7 1075 aaKnown RBP13.84□□□□□ -0.19
CDT1-203ENST00000569140 SUSD3Q96L08 255 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 CHST7Q9NS84 486 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 CD207Q9UJ71 328 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 AGAP1Q9UPQ3 857 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 CTNND2Q9UQB3 1225 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 TRAF3IP3Q9Y228 551 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 TIMM13Q9Y5L4 95 aaPredicted RBP13.84□□□□□ -0.19
CDT1-203ENST00000569140 IRAK3Q9Y616 596 aa13.84□□□□□ -0.19
CDT1-203ENST00000569140 H7C4K7 107 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 SYN3O14994 580 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 PHACTR2O75167 634 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 EFEMP2O95967 443 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 SPATA31D3P0C874 917 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 ODC1P11926 461 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 FGFR3P22607 806 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 CASP4P49662 377 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 TAF6P49848 677 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 ADAM9Q13443 819 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 BIRC3Q13489 604 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 PSMD6Q15008 389 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 DUOXA2Q1HG44 320 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 CTC1Q2NKJ3 1217 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 SV2CQ496J9 727 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 VARS2Q5ST30 1063 aaKnown RBP13.83□□□□□ -0.2
CDT1-203ENST00000569140 ELMSAN1Q6PJG2 1045 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 SPATA31D4Q6ZUB0 917 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 C1orf127Q8N9H9 656 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 APPL2Q8NEU8 664 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 OR5B17Q8NGF7 314 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 SPATA20Q8TB22 786 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 LNX1Q8TBB1 728 aaPredicted RBP13.83□□□□□ -0.2
CDT1-203ENST00000569140 PIK3R5Q8WYR1 880 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 EEF2KMTQ96G04 330 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 FBXL18Q96ME1 805 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 ASB2Q96Q27 587 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 POP1Q99575 1024 aaKnown RBP13.83□□□□□ -0.2
CDT1-203ENST00000569140 CLSTN2Q9H4D0 955 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 MAN1C1Q9NR34 630 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 INTS13Q9NVM9 706 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 ITGA11Q9UKX5 1188 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 PCDHB8Q9UN66 801 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 PTPRJQ12913 1337 aa13.83□□□□□ -0.2
CDT1-203ENST00000569140 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.82□□□□□ -0.2
CDT1-203ENST00000569140 ANO9A1A5B4 782 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 TRIM49BA6NDI0 452 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 PIRO00625 290 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 LILRB3O75022 631 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 KRT13P13646 458 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 LTBRP36941 435 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 PNPLA4P41247 253 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 CLCN4P51793 760 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 LILRA4P59901 499 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 RBP5P82980 135 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 YWHAHQ04917 246 aaPredicted RBP13.82□□□□□ -0.2
CDT1-203ENST00000569140 LEXMQ3ZCV2 418 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 CTXN3Q4LDR2 81 aa13.82□□□□□ -0.2
CDT1-203ENST00000569140 RARS2Q5T160 578 aaKnown RBP13.82□□□□□ -0.2
CDT1-203ENST00000569140 PTCRAQ6ISU1 281 aaPredicted RBP13.82□□□□□ -0.2
CDT1-203ENST00000569140 ZNF280DQ6N043 979 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms