RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 XPOTO43592 962 aaKnown RBP11.28□□□□□ -0.6
CDH3-210ENST00000569117 OFD1O75665 1012 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 SERPINC1P01008 464 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 TMEM191BP0C7N4 346 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 TNNI1P19237 187 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
CDH3-210ENST00000569117 FMO5P49326 533 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 SCNN1GP51170 649 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 AFF1P51825 1210 aaKnown RBP11.28□□□□□ -0.6
CDH3-210ENST00000569117 MYL7Q01449 175 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 NAB2Q15742 525 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 ZBTB6Q15916 424 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 DUOXA2Q1HG44 320 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 ZACNQ401N2 412 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 CBWD6Q4V339 395 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 CBWD3Q5JTY5 395 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 GLRA4Q5JXX5 417 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 CBWD5Q5RIA9 395 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 RASIP1Q5U651 963 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 C15orf39Q6ZRI6 1047 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 SND1Q7KZF4 910 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH3-210ENST00000569117 CREBRFQ8IUR6 639 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 ABI1Q8IZP0 508 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 OR5B17Q8NGF7 314 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 HELQQ8TDG4 1101 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 ANKRD36BP1Q96IX9 119 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 SLC9A7Q96T83 725 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 POP1Q99575 1024 aaKnown RBP11.28□□□□□ -0.6
CDH3-210ENST00000569117 MRPL9Q9BYD2 267 aaKnown RBP11.28□□□□□ -0.6
CDH3-210ENST00000569117 TMEM117Q9H0C3 514 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 GRPEL1Q9HAV7 217 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 UBQLN1Q9UMX0 589 aaKnown RBP11.28□□□□□ -0.6
CDH3-210ENST00000569117 PLAGL2Q9UPG8 496 aa11.28□□□□□ -0.6
CDH3-210ENST00000569117 PDE4DIPQ5VU43 2346 aa11.27□□□□□ -0.6
CDH3-210ENST00000569117 ZBBXA8MT70 800 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 DGKIO75912 1065 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 TNNC2P02585 160 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 C4BPAP04003 597 aaKnown RBP11.27□□□□□ -0.61
CDH3-210ENST00000569117 THP07101 528 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 CYP3A5P20815 502 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 GCLMP48507 274 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 TFAMQ00059 246 aaKnown RBP11.27□□□□□ -0.61
CDH3-210ENST00000569117 FILIP1LQ4L180 1135 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 NOMO2Q5JPE7 1267 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 TDRD10Q5VZ19 366 aaKnown RBP11.27□□□□□ -0.61
CDH3-210ENST00000569117 LMBRD2Q68DH5 695 aaPredicted RBP11.27□□□□□ -0.61
CDH3-210ENST00000569117 KRT39Q6A163 491 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 SV2AQ7L0J3 742 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 LRRC43Q8N309 656 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 C1orf127Q8N9H9 656 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 BEST2Q8NFU1 509 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 URGCPQ8TCY9 931 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 CACTINQ8WUQ7 758 aaKnown RBP11.27□□□□□ -0.61
CDH3-210ENST00000569117 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 GDF15Q99988 308 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 VPS16Q9H269 839 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 CXXC1Q9P0U4 656 aaPredicted RBP11.27□□□□□ -0.61
CDH3-210ENST00000569117 IFNKQ9P0W0 207 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 KANSL3Q9P2N6 904 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 TUBGCP4Q9UGJ1 667 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 ITGA11Q9UKX5 1188 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 INPP5FQ9Y2H2 1132 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 COQ4Q9Y3A0 265 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 TSC2P49815 1807 aa11.27□□□□□ -0.61
CDH3-210ENST00000569117 NLRC5Q86WI3 1866 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 H0YGN5 161 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 PES1O00541 588 aaKnown RBP11.26□□□□□ -0.61
CDH3-210ENST00000569117 AP5Z1O43299 807 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 CBFA2T2O43439 604 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 GJB5O95377 273 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 TPM3P06753 285 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 LRPAP1P30533 357 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 UBASH3AP57075 661 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 SOX4Q06945 474 aaPredicted RBP11.26□□□□□ -0.61
CDH3-210ENST00000569117 DSC1Q08554 894 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 BIRC3Q13489 604 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 EPC2Q52LR7 807 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 TRAPPC11Q7Z392 1133 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 CMTR2Q8IYT2 770 aaKnown RBP11.26□□□□□ -0.61
CDH3-210ENST00000569117 CXorf38Q8TB03 319 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 PHOSPHO2Q8TCD6 241 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 C18orf25Q96B23 403 aaPredicted RBP11.26□□□□□ -0.61
CDH3-210ENST00000569117 ZNF689Q96CS4 500 aaPredicted RBP11.26□□□□□ -0.61
CDH3-210ENST00000569117 FAM84AQ96KN4 292 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 CASD1Q96PB1 797 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 ERGIC2Q96RQ1 377 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 XPO4Q9C0E2 1151 aaKnown RBP11.26□□□□□ -0.61
CDH3-210ENST00000569117 MMRN2Q9H8L6 949 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 TBC1D13Q9NVG8 400 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 MIOSQ9NXC5 875 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 SCN1AP35498 2009 aa11.26□□□□□ -0.61
CDH3-210ENST00000569117 A0A1W2PQC6 194 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 UPP2O95045 317 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 VNN1O95497 513 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 POMCP01189 267 aa11.25□□□□□ -0.61
CDH3-210ENST00000569117 ITGB3P05106 788 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms