RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PPP3CAQ08209 521 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 SCARA3Q6AZY7 606 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 CD300LGQ6UXG3 332 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 TRIM59Q8IWR1 403 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 AOPEPQ8N6M6 819 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 SPPL3Q8TCT6 385 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 HASPINQ8TF76 798 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 SLC35C1Q96A29 364 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 ALG13Q9NP73 1137 aaKnown RBP18.07■□□□□ 0.48
COMMD4-224ENST00000568877 FANCLQ9NW38 375 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 MAGEC2Q9UBF1 373 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-224ENST00000568877 SIX4Q9UIU6 781 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 AGAP1Q9UPQ3 857 aa18.07■□□□□ 0.48
COMMD4-224ENST00000568877 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
COMMD4-224ENST00000568877 PHACTR2O75167 634 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 GCLMP48507 274 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 ZNF445P59923 1031 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 UBE3AQ05086 875 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 BIRC3Q13489 604 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 NCAPHQ15003 741 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 ZACNQ401N2 412 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 HSP90AA4PQ58FG1 418 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 TDRD10Q5VZ19 366 aaKnown RBP18.06■□□□□ 0.48
COMMD4-224ENST00000568877 C15orf39Q6ZRI6 1047 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 SV2AQ7L0J3 742 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 DDX53Q86TM3 631 aaKnown RBP18.06■□□□□ 0.48
COMMD4-224ENST00000568877 DHX40Q8IX18 779 aaKnown RBP18.06■□□□□ 0.48
COMMD4-224ENST00000568877 MMRN2Q9H8L6 949 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 TMEM8AQ9HCN3 771 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 PUF60Q9UHX1 559 aaKnown RBP18.06■□□□□ 0.48
COMMD4-224ENST00000568877 LZTS1Q9Y250 596 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 NUB1Q9Y5A7 615 aa18.06■□□□□ 0.48
COMMD4-224ENST00000568877 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.06■□□□□ 0.48
COMMD4-224ENST00000568877 SF3B1O75533 1304 aaKnown RBP eCLIP18.05■□□□□ 0.48
COMMD4-224ENST00000568877 SMTNL1A8MU46 457 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 KCNJ18B7U540 433 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 RFXAPO00287 272 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 GRM6O15303 877 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 TRAPPC3O43617 180 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 EFEMP2O95967 443 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 CST3P01034 146 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-224ENST00000568877 PAX3P23760 479 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 PNPLA4P41247 253 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 MTIF2P46199 727 aaKnown RBP18.05■□□□□ 0.48
COMMD4-224ENST00000568877 BRCC3P46736 316 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 FXR1P51114 621 aaKnown RBP eCLIP18.05■□□□□ 0.48
COMMD4-224ENST00000568877 LILRA4P59901 499 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 TRPC3Q13507 836 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 KCNJ12Q14500 433 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 GRIN2CQ14957 1233 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 CDKAL1Q5VV42 579 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 KRT39Q6A163 491 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 FUT10Q6P4F1 479 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 LRRC52Q8N7C0 313 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 GDPD5Q8WTR4 605 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 POF1BQ8WVV4 589 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 ZNF560Q96MR9 790 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 VN1R3Q9BXE9 311 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 GPR62Q9BZJ7 368 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 TSPY26PQ9H489 355 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 CBX8Q9HC52 389 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 STK39Q9UEW8 545 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 NLRC5Q86WI3 1866 aa18.05■□□□□ 0.48
COMMD4-224ENST00000568877 BECN2A8MW95 431 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 TAF6P49848 677 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 MXI1P50539 228 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 ELAVL2Q12926 359 aaKnown RBP18.04■□□□□ 0.48
COMMD4-224ENST00000568877 NCOA4Q13772 614 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 IQCB1Q15051 598 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 TIGD5Q53EQ6 642 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 TCP11X2Q5H9J9 407 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 RNF168Q8IYW5 571 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-224ENST00000568877 FAM161BQ96MY7 647 aa18.04■□□□□ 0.48
COMMD4-224ENST00000568877 CHD7Q9P2D1 2997 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 SPTLC1O15269 473 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 LPXNO60711 386 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 VNN1O95497 513 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 SOD2P04179 222 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 DNAJB1P25685 340 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 EEF1GP26641 437 aaKnown RBP18.03■□□□□ 0.48
COMMD4-224ENST00000568877 AARSP49588 968 aaKnown RBP eCLIP18.03■□□□□ 0.48
COMMD4-224ENST00000568877 KCNH2Q12809 1159 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 MYO1EQ12965 1108 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 SV2CQ496J9 727 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 CBWD6Q4V339 395 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 CBWD3Q5JTY5 395 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 CBWD5Q5RIA9 395 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 FAM171A1Q5VUB5 890 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 TAS1R1Q7RTX1 841 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 HPDLQ96IR7 371 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 SUSD3Q96L08 255 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 LMAN2LQ9H0V9 348 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 HSD3B7Q9H2F3 369 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 PRDM12Q9H4Q4 367 aa18.03■□□□□ 0.48
COMMD4-224ENST00000568877 KPNA7A9QM74 516 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 I3L4J1 428 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 STAU1O95793 577 aaKnown RBP18.02■□□□□ 0.48
COMMD4-224ENST00000568877 HLA-DRAP01903 254 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 AFPP02771 609 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms