RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 SASH3O75995 380 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 SEC31AO94979 1220 aaKnown RBP12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 LCA5LO95447 670 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 ITGA4P13612 1032 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 GUCY2CP25092 1073 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 PPM1AP35813 382 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 LTBRP36941 435 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 ALDH7A1P49419 539 aaKnown RBP12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 KCNQ1P51787 676 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 SLC12A3P55017 1021 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 MAPK7Q13164 816 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 MAPK6Q16659 721 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 SLC27A1Q6PCB7 646 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 CDR2LQ86X02 465 aaPredicted RBP12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 ZNF280BQ86YH2 543 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 SLC39A11Q8N1S5 342 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 TXLNBQ8N3L3 684 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 DEPTORQ8TB45 409 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 EPC1Q9H2F5 836 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 NHEJ1Q9H9Q4 299 aaPredicted RBP12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 TLR9Q9NR96 1032 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 KANSL3Q9P2N6 904 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 L1RE1Q9UN81 338 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 INPP5FQ9Y2H2 1132 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 HES2Q9Y543 173 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 SAR1BQ9Y6B6 198 aa12.54□□□□□ -0.4
SNAPC5-208ENST00000568875 TARSL2A2RTX5 802 aaKnown RBP12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 NT5C1B-RDH14C9J2C7 533 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 FSCN2O14926 492 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 HIP1RO75146 1068 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 DDHD2O94830 711 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 CSPG5O95196 566 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 EDN1P05305 212 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 GALTP07902 379 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 PLA2G4BP0C869 781 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 PRLRP16471 622 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 NPTX2P47972 431 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 EFNA5P52803 228 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 KRT17Q04695 432 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 PDE12Q6L8Q7 609 aaKnown RBP12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 ADGRD2Q7Z7M1 963 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 JAKMIP2Q96AA8 810 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 TSG101Q99816 390 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 NTPCRQ9BSD7 190 aaKnown RBP12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 KIFC3Q9BVG8 833 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 TIPINQ9BVW5 301 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 NUCKS1Q9H1E3 243 aaKnown RBP12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 NDST4Q9H3R1 872 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 C17orf75Q9HAS0 396 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 MIOSQ9NXC5 875 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 PSD3Q9NYI0 1048 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 GUCA1BQ9UMX6 200 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 SIK3Q9Y2K2 1263 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 USP20Q9Y2K6 914 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 PCDHGC5Q9Y5F6 944 aa12.53□□□□□ -0.4
SNAPC5-208ENST00000568875 CARNS1A5YM72 827 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 ARL5CA6NH57 179 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 SFI1A8K8P3 1242 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 B4GALT3O60512 393 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 ABL1P00519 1130 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 PRKCBP05771 671 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 KCNA5P22460 613 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 VAV2P52735 878 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 PEX3P56589 373 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 RNASELQ05823 741 aaKnown RBP12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 ITIH3Q06033 890 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 KIF5AQ12840 1032 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 ADAM15Q13444 863 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 PRPF4BQ13523 1007 aaKnown RBP12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 SPA17Q15506 151 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 LEXMQ3ZCV2 418 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 ARSHQ5FYA8 562 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 TMEM173Q86WV6 379 aaPredicted RBP12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 GSTCDQ8NEC7 633 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 URGCPQ8TCY9 931 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 RUBCNQ92622 972 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 CCDC42Q96M95 316 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 GAD1Q99259 594 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 TRIM6Q9C030 488 aaPredicted RBP12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 ACBD3Q9H3P7 528 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 KCND2Q9NZV8 630 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 DNAJB4Q9UDY4 337 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 GIT1Q9Y2X7 761 aa12.52□□□□□ -0.41
SNAPC5-208ENST00000568875 K7ERI5 159 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 ZC3H11AO75152 810 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 NPTXRO95502 500 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 GNA14O95837 355 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 ALDH2P05091 517 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 MCM6Q14566 821 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 IQCEQ6IPM2 695 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 TRIM58Q8NG06 486 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 SYN2Q92777 582 aaPredicted RBP12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 PPP2R3CQ969Q6 453 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
SNAPC5-208ENST00000568875 CEP63Q96MT8 703 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms