RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 HAPLN2Q9GZV7 340 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 ST6GALNAC4Q9H4F1 302 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 ZHX3Q9H4I2 956 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 PIDD1Q9HB75 910 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 GOLGA2P5Q9HBQ8 144 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SEL1LQ9UBV2 794 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 LIMD1Q9UGP4 676 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 FBXW11Q9UKB1 542 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 BACE2Q9Y5Z0 518 aa5.22□□□□□ -1.57
CLK3-219ENST00000567805 SCN1AP35498 2009 aa5.21□□□□□ -1.57
CLK3-219ENST00000567805 A0A0B4J269 797 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 MYMKA6NI61 221 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 H7C4K7 107 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 I3L4J1 428 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 MEFVO15553 781 aaPredicted RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 ADAM12O43184 909 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 FAM189A1O60320 539 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 N4BP1O75113 896 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 XYLBO75191 536 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 ASGR2P07307 311 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 C8AP07357 584 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 ADRB2P07550 413 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 POU2F2P09086 479 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 MYBP10242 640 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 GAP43P17677 238 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 CYP3A5P20815 502 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 IGFBP6P24592 240 aaPredicted RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 TKTP29401 623 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 NMT1P30419 496 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 GBP2P32456 591 aaPredicted RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 TNFSF9P41273 254 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 BRCC3P46736 316 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 NASPP49321 788 aaPredicted RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 POU5F1Q01860 360 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 TDGQ13569 410 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 MRPL58Q14197 206 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 STK38Q15208 465 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 ZBTB6Q15916 424 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 ENOX2Q16206 610 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 SEZ6Q53EL9 994 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 PPM1LQ5SGD2 360 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 AXDND1Q5T1B0 1012 aaPredicted RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 SLFN12LQ6IEE8 588 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 SLC8B1Q6J4K2 584 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 SLC39A4Q6P5W5 647 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 SV2BQ7L1I2 683 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 HSCBQ8IWL3 235 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 CD302Q8IX05 232 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 SLC7A14Q8TBB6 771 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 DDX12PQ92771 950 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 NXPE3Q969Y0 559 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 HVCN1Q96D96 273 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 SUSD3Q96L08 255 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 FIZ1Q96SL8 496 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 MSTO1Q9BUK6 570 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 OXCT2Q9BYC2 517 aaPredicted RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 RPF1Q9H9Y2 349 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 KCNK12Q9HB15 430 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.21□□□□□ -1.58
CLK3-219ENST00000567805 IGSF9Q9P2J2 1179 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 EPS15L1Q9UBC2 864 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 TUBGCP4Q9UGJ1 667 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 UBQLN1Q9UMX0 589 aaKnown RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 DUSP12Q9UNI6 340 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 NUB1Q9Y5A7 615 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 CDY1Q9Y6F8 540 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 ZFP37Q9Y6Q3 630 aaPredicted RBP5.21□□□□□ -1.58
CLK3-219ENST00000567805 MIA3Q5JRA6 1907 aa5.21□□□□□ -1.58
CLK3-219ENST00000567805 FRYLO94915 3013 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ARHGEF37A1IGU5 675 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 FRMD3A2A2Y4 597 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 WDR27A2RRH5 827 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 LACTBL1A8MY62 500 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 M0QZQ0 153 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ARHGAP33O14559 1287 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 SPTLC2O15270 562 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 HRO43593 1189 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 TBC1D4O60343 1298 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 PPP6R2O75170 966 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ABLIM3O94929 683 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 YEATS4O95619 227 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 HSP90AA1P07900 732 aaKnown RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 LAMP2P13473 410 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ATF2P15336 505 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 PAX3P23760 479 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 FSHRP23945 695 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 LRPAP1P30533 357 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ELF1P32519 619 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 MCM4P33991 863 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 STAT6P42226 847 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ROR1Q01973 937 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 SPAG1Q07617 926 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ALCAMQ13740 583 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 POSTNQ15063 836 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ZC2HC1CQ53FD0 456 aaPredicted RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 ZBTB41Q5SVQ8 909 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 L1TD1Q5T7N2 865 aaKnown RBP5.2□□□□□ -1.58
CLK3-219ENST00000567805 SPATA1Q5VX52 437 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 TPGS2Q68CL5 300 aa5.2□□□□□ -1.58
CLK3-219ENST00000567805 ADALQ6DHV7 355 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms