RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 MYBPC2Q14324 1141 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 GLRA4Q5JXX5 417 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 VARS2Q5ST30 1063 aaKnown RBP12.16□□□□□ -0.46
CDH3-206ENST00000567674 AXDND1Q5T1B0 1012 aaPredicted RBP12.16□□□□□ -0.46
CDH3-206ENST00000567674 ZNF280DQ6N043 979 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 SPATA18Q8TC71 538 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 TMEM174Q8WUU8 243 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 MRPL44Q9H9J2 332 aaKnown RBP12.16□□□□□ -0.46
CDH3-206ENST00000567674 KIAA1586Q9HCI6 787 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 WNT16Q9UBV4 365 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 LIMD1Q9UGP4 676 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 AGO2Q9UKV8 859 aaKnown RBP12.16□□□□□ -0.46
CDH3-206ENST00000567674 DUSP12Q9UNI6 340 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 USP20Q9Y2K6 914 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 ATP6V1DQ9Y5K8 247 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 CITO14578 2027 aa12.16□□□□□ -0.46
CDH3-206ENST00000567674 DENND4AQ7Z401 1863 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 ANO9A1A5B4 782 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 MYMKA6NI61 221 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 ANHXE9PGG2 379 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 ZNF197O14709 1029 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 CYP11A1P05108 521 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 CXCL8P10145 99 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 LAMP2P13473 410 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 PNPLA4P41247 253 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 DHX8Q14562 1220 aaKnown RBP12.15□□□□□ -0.46
CDH3-206ENST00000567674 SURF1Q15526 300 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 ENOX2Q16206 610 aaKnown RBP12.15□□□□□ -0.46
CDH3-206ENST00000567674 ADALQ6DHV7 355 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 PRSS55Q6UWB4 352 aaPredicted RBP12.15□□□□□ -0.46
CDH3-206ENST00000567674 USP49Q70CQ1 688 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 MTSS1LQ765P7 747 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 ASCL5Q7RTU5 278 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 C3orf58Q8NDZ4 430 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 CACTINQ8WUQ7 758 aaKnown RBP12.15□□□□□ -0.46
CDH3-206ENST00000567674 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 BORCS6Q96GS4 357 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 CLIC6Q96NY7 704 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 GPR88Q9GZN0 384 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 HAPLN2Q9GZV7 340 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 CXCL16Q9H2A7 254 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 KCNK12Q9HB15 430 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 GDE1Q9NZC3 331 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 AFF4Q9UHB7 1163 aaKnown RBP12.15□□□□□ -0.46
CDH3-206ENST00000567674 USP25Q9UHP3 1055 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 RCOR1Q9UKL0 485 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 CDH7Q9ULB5 785 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 CDY1Q9Y6F8 540 aa12.15□□□□□ -0.46
CDH3-206ENST00000567674 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 PRR23AA6NEV1 266 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 LACTBL1A8MY62 500 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 PIRO00625 290 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 EIF3DO15371 548 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDH3-206ENST00000567674 MEFVO15553 781 aaPredicted RBP12.14□□□□□ -0.47
CDH3-206ENST00000567674 RFPL2O75678 378 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 FGF19O95750 216 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 F13A1P00488 732 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 PTPN2P17706 415 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 FSHRP23945 695 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 TKTP29401 623 aaKnown RBP12.14□□□□□ -0.47
CDH3-206ENST00000567674 NMT1P30419 496 aaKnown RBP12.14□□□□□ -0.47
CDH3-206ENST00000567674 YWHAHQ04917 246 aaPredicted RBP12.14□□□□□ -0.47
CDH3-206ENST00000567674 PLD1Q13393 1074 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 E2F4Q16254 413 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 HASPINQ8TF76 798 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 C2orf15Q8WU43 125 aaKnown RBP12.14□□□□□ -0.47
CDH3-206ENST00000567674 B3GALT6Q96L58 329 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 ZHX3Q9H4I2 956 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 PANK4Q9NVE7 773 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 ASB3Q9Y575 518 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 KMT2EQ8IZD2 1858 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 SPTBN4Q9H254 2564 aa12.14□□□□□ -0.47
CDH3-206ENST00000567674 UBE4BO95155 1302 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 ZFHX2Q9C0A1 2572 aaPredicted RBP12.13□□□□□ -0.47
CDH3-206ENST00000567674 FAM163BP0C2L3 166 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 SRFP11831 508 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 ODC1P11926 461 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 RPL17P18621 184 aaKnown RBP12.13□□□□□ -0.47
CDH3-206ENST00000567674 AVPR2P30518 371 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 MCM4P33991 863 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 LILRA4P59901 499 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 ROR1Q01973 937 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 CACNB1Q02641 598 aaPredicted RBP12.13□□□□□ -0.47
CDH3-206ENST00000567674 CEBPZQ03701 1054 aaKnown RBP12.13□□□□□ -0.47
CDH3-206ENST00000567674 GPR17Q13304 367 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 TMEM132DQ14C87 1099 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 SPECC1Q5M775 1068 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 FAM173BQ6P4H8 233 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 SLC39A4Q6P5W5 647 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 RSPO2Q6UXX9 243 aaPredicted RBP12.13□□□□□ -0.47
CDH3-206ENST00000567674 DYMQ7RTS9 669 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 USP37Q86T82 979 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 SFR1Q86XK3 245 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 ELMOD1Q8N336 334 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 POMGNT1Q8WZA1 660 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 RABGGTAQ92696 567 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms