RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 SPTLC1O15269 473 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 LINC01565O15544 149 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 NCK2O43639 380 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 TBC1D4O60343 1298 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 TBX10O75333 385 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 NR3C1P04150 777 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 URODP06132 367 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 NRIP1P48552 1158 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 GLUD2P49448 558 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 PMS1P54277 932 aaKnown RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 RBM10P98175 930 aaKnown RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 DLX2Q07687 328 aaPredicted RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 MRPL58Q14197 206 aaKnown RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 EDRF1Q3B7T1 1238 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 FAM171A1Q5VUB5 890 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 FOXR2Q6PJQ5 311 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 C1orf127Q8N9H9 656 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 BEST2Q8NFU1 509 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 OR5B17Q8NGF7 314 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 MICAL1Q8TDZ2 1067 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 ADAMTS19Q8TE59 1207 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 SLC22A17Q8WUG5 538 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 FAM212AQ96EL1 285 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 MSLNLQ96KJ4 702 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 KLHL5Q96PQ7 755 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 UBE2ZQ9H832 354 aaPredicted RBP13.44□□□□□ -0.26
RNF40-211ENST00000567365 DPP3Q9NY33 737 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 FNIP2Q9P278 1114 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 SIX4Q9UIU6 781 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 COG5Q9UP83 839 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
RNF40-211ENST00000567365 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
RNF40-211ENST00000567365 SYN3O14994 580 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 EXOC3O60645 756 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 C1RP00736 705 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 PAX3P23760 479 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 LILRA4P59901 499 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 SURF1Q15526 300 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 CAMK4Q16566 473 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 C1orf220Q5T0J3 134 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 RBM43Q6ZSC3 357 aaKnown RBP13.43□□□□□ -0.26
RNF40-211ENST00000567365 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 TRIML1Q8N9V2 468 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 RDH13Q8NBN7 331 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 PARD3BQ8TEW8 1205 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 ZNF516Q92618 1163 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 PPP2R3CQ969Q6 453 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 TTC28Q96AY4 2481 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 NECAB3Q96P71 396 aaPredicted RBP13.43□□□□□ -0.26
RNF40-211ENST00000567365 TTPALQ9BTX7 342 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
RNF40-211ENST00000567365 CLEC1BQ9P126 229 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 THEGQ9P2T0 379 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 SSX2IPQ9Y2D8 614 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 HCFC2Q9Y5Z7 792 aa13.43□□□□□ -0.26
RNF40-211ENST00000567365 FSD2A1L4K1 749 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 TEX28O15482 410 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 ADAM12O43184 909 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 TRAPPC3O43617 180 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 CALUO43852 315 aaPredicted RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 AKAP3O75969 853 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 PAPLNO95428 1278 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 NR2F2P24468 414 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 CCNE1P24864 410 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 TKTP29401 623 aaKnown RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 MRPS5P82675 430 aaKnown RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 ENPEPQ07075 957 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 ISM2Q6H9L7 571 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 LILRA6Q6PI73 481 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 PRSS55Q6UWB4 352 aaPredicted RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 RSPO2Q6UXX9 243 aaPredicted RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 RBM23Q86U06 439 aaKnown RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 RIN2Q8WYP3 895 aaPredicted RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 HLA-CQ95604 372 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 DHTKD1Q96HY7 919 aaPredicted RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 CGRRF1Q99675 332 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 MTMR12Q9C0I1 747 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.42□□□□□ -0.26
RNF40-211ENST00000567365 MTRRQ9UBK8 725 aa13.42□□□□□ -0.26
RNF40-211ENST00000567365 MTCL1Q9Y4B5 1905 aaKnown RBP13.42□□□□□ -0.26
RNF40-211ENST00000567365 PPP1R2P41236 205 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 CLCN4P51793 760 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 TFAMQ00059 246 aaKnown RBP13.41□□□□□ -0.26
RNF40-211ENST00000567365 TFF2Q03403 129 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 LRRC63Q05C16 580 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 BMS1Q14692 1282 aaKnown RBP13.41□□□□□ -0.26
RNF40-211ENST00000567365 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
RNF40-211ENST00000567365 LMBRD2Q68DH5 695 aaPredicted RBP13.41□□□□□ -0.26
RNF40-211ENST00000567365 ANKRD40Q6AI12 368 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 TTI2Q6NXR4 508 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 LRRC52Q8N7C0 313 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 TMC2Q8TDI7 906 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 CACTINQ8WUQ7 758 aaKnown RBP13.41□□□□□ -0.26
RNF40-211ENST00000567365 MED15Q96RN5 788 aa13.41□□□□□ -0.26
RNF40-211ENST00000567365 POP1Q99575 1024 aaKnown RBP13.41□□□□□ -0.26
RNF40-211ENST00000567365 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
RNF40-211ENST00000567365 CLSTN3Q9BQT9 956 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms