RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 TDRD10Q5VZ19 366 aaKnown RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 DPY19L2P1Q6NXN4 242 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 ALKAL1Q6UXT8 129 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 C15orf39Q6ZRI6 1047 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 RNF169Q8NCN4 708 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 SMG8Q8ND04 991 aaKnown RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 ZSWIM2Q8NEG5 633 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 ZNF830Q96NB3 372 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 LBHD1Q9BQE6 289 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 STK33Q9BYT3 514 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 TSGA10Q9BZW7 698 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 GANQ9H2C0 597 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 RRAGDQ9NQL2 400 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 PPP2R2CQ9Y2T4 447 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 ADGRG1Q9Y653 693 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 EPN1Q9Y6I3 576 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-207ENST00000566095 CITO14578 2027 aa10.56□□□□□ -0.72
SF3B3-207ENST00000566095 SMIM28A0A1B0GU29 152 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 ARL5CA6NH57 179 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 INPPL1O15357 1258 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 CAPN15O75808 1086 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 NOL4O94818 638 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 KIF4AO95239 1232 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 NDUFA10O95299 355 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 SERPING1P05155 500 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 NFICP08651 508 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 FAM163BP0C2L3 166 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 SLC9A1P19634 815 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 AKAP5P24588 427 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 ETF1P62495 437 aaKnown RBP10.55□□□□□ -0.72
SF3B3-207ENST00000566095 NOP14P78316 857 aaKnown RBP10.55□□□□□ -0.72
SF3B3-207ENST00000566095 FAM189BP81408 668 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 RNASELQ05823 741 aaKnown RBP10.55□□□□□ -0.72
SF3B3-207ENST00000566095 MBTPS1Q14703 1052 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 C1orf220Q5T0J3 134 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 PPP1R2P3Q6NXS1 205 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 PDXDC1Q6P996 788 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 PSRC1Q6PGN9 363 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-207ENST00000566095 WDR59Q6PJI9 974 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 UBE2Q1Q7Z7E8 422 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 PPM1KQ8N3J5 372 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 PLEKHO2Q8TD55 490 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 CPLX3Q8WVH0 158 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 CCDC42Q96M95 316 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 POP1Q99575 1024 aaKnown RBP10.55□□□□□ -0.72
SF3B3-207ENST00000566095 NIF3L1Q9GZT8 377 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 WNT8AQ9H1J5 351 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 DEF6Q9H4E7 631 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 VRTNQ9H8Y1 702 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 CYP3A43Q9HB55 503 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 IL23AQ9NPF7 189 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 INTUQ9ULD6 942 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 NR2E3Q9Y5X4 410 aa10.55□□□□□ -0.72
SF3B3-207ENST00000566095 BTNL10A8MVZ5 291 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 ASS1P00966 412 aaKnown RBP10.54□□□□□ -0.72
SF3B3-207ENST00000566095 ITGB3P05106 788 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 LRPAP1P30533 357 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 MLH1P40692 756 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 TAF6P49848 677 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 JAM2P57087 298 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 FPGSQ05932 587 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 TUSC3Q13454 348 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 ASIC2Q16515 512 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 NOMO2Q5JPE7 1267 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 LMBRD2Q68DH5 695 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-207ENST00000566095 RRAGAQ7L523 313 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 DEFB128Q7Z7B8 93 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 EFCAB13Q8IY85 973 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 TMEM192Q8IY95 271 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 C1orf127Q8N9H9 656 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 OR5B17Q8NGF7 314 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 KIF18AQ8NI77 898 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 LMO3Q8TAP4 145 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 SPATA18Q8TC71 538 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 TAS1R2Q8TE23 839 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 SCLYQ96I15 445 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 HPDLQ96IR7 371 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 GAD1Q99259 594 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 UBE2TQ9NPD8 197 aaPredicted RBP10.54□□□□□ -0.72
SF3B3-207ENST00000566095 STK39Q9UEW8 545 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 DNAJC12Q9UKB3 198 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 AGAP1Q9UPQ3 857 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 HES2Q9Y543 173 aa10.54□□□□□ -0.72
SF3B3-207ENST00000566095 ENPP3O14638 875 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 TRAPPC3O43617 180 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 KRT86O43790 486 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 MGEA5O60502 916 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 POLR2BP30876 1174 aaKnown RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 SOX5P35711 763 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 CUL2Q13617 745 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 BMS1Q14692 1282 aaKnown RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 SPA17Q15506 151 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 ZBTB6Q15916 424 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 ASTE1Q2TB18 679 aaPredicted RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 TDRD12Q587J7 1177 aaKnown RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 AGMOQ6ZNB7 445 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 DPH6Q7L8W6 267 aa10.53□□□□□ -0.72
SF3B3-207ENST00000566095 ZNF598Q86UK7 904 aaKnown RBP10.53□□□□□ -0.72
SF3B3-207ENST00000566095 REXO1L1PQ8IX06 675 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms