RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 TEX13BQ9BXU2 312 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 CD274Q9NZQ7 290 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 OVOS2A0A0G2JMS6 1433 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 OVOS2A0A0J9YW53 1432 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 OVOS2Q6IE36 1432 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 ZNF263O14978 683 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 RPS6KA5O75582 802 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 ZNF157P51786 506 aaPredicted RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 TWF1Q12792 350 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 SLC35G2Q8TBE7 412 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 GRAMD1AQ96CP6 724 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 PRMT1Q99873 361 aaKnown RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 TMEM117Q9H0C3 514 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 CNOT7Q9UIV1 285 aaKnown RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 E2F8A0AVK6 867 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 USP27XA6NNY8 438 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 SLC16A3O15427 465 aaKnown RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 GH1P01241 217 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 TASP1Q9H6P5 420 aa14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 XPO7Q9UIA9 1087 aaKnown RBP14.28□□□□□ -0.12
CX3CL1-204ENST00000565912 TCP11X1B4DZS4 312 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 ITGA4P13612 1032 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 CAPZA2P47755 286 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 C12orf60Q5U649 245 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 SHCBP1Q8NEM2 672 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 ZNF555Q8NEP9 628 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 SEPT1Q8WYJ6 367 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 OSBPL5Q9H0X9 879 aaPredicted RBP14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 FAM49BQ9NUQ9 324 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 APEX2Q9UBZ4 518 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 CRB1P82279 1406 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 SUPT3HB4E1H0 165 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 MYO1CO00159 1063 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 CYP2C19P33261 490 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 SGSM1Q2NKQ1 1148 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 RBBP8NLQ8NC74 664 aaPredicted RBP14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 TIPINQ9BVW5 301 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.27□□□□□ -0.121e-9■■■□□ 16
CX3CL1-204ENST00000565912 WDR35Q9P2L0 1181 aa14.27□□□□□ -0.12
CX3CL1-204ENST00000565912 FKBP9O95302 570 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 PDIA5Q14554 519 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 NBPF20Q3BBV1 942 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 FKBP9P1Q75LS8 142 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 HS6ST3Q8IZP7 471 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 SPATA4Q8NEY3 305 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 C6orf203Q9P0P8 240 aaPredicted RBP14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 H0Y626 953 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 TRIM16O95361 564 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 ENO3P13929 434 aaPredicted RBP14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 VCAM1P19320 739 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 PTRHD1Q6GMV3 140 aaKnown RBP14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 PLEKHM3Q6ZWE6 761 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 IFNEQ86WN2 208 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 STKLD1Q8NE28 680 aa14.27□□□□□ -0.13
CX3CL1-204ENST00000565912 A0A0G2JLW4 131 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 TERF2Q15554 542 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 MS4A14Q96JA4 679 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 MARCOQ9UEW3 520 aaPredicted RBP14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 ZNRF3Q9ULT6 936 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 APOA1P02647 267 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 KRT8P05787 483 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 OR1G1P47890 313 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 GUCY1A3Q02108 690 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 GRIN1Q05586 938 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 SPATA21Q7Z572 469 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 SLC7A14Q8TBB6 771 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 STXBP3O00186 592 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 AKAP10O43572 662 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 ETFBP38117 255 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 SKOR1P84550 965 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 STX3Q13277 289 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 SNRNP35Q16560 246 aaKnown RBP14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 UGP2Q16851 508 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 RBM15Q96T37 977 aaKnown RBP eCLIP14.26□□□□□ -0.136e-9■■□□□ 12.8
CX3CL1-204ENST00000565912 REEP2Q9BRK0 252 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 TRIM51Q9BSJ1 452 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 STK33Q9BYT3 514 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 C20orf96Q9NUD7 363 aaPredicted RBP14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 DDX28Q9NUL7 540 aaKnown RBP14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 PCYT1AP49585 367 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 KCNB1Q14721 858 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 EMC2Q15006 297 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 PARP9Q8IXQ6 854 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 INPP5DQ92835 1189 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 ARHGEF26Q96DR7 871 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 GJD4Q96KN9 370 aaPredicted RBP14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 LRRC1Q9BTT6 524 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 ZNF556Q9HAH1 456 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 SYTL2Q9HCH5 934 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 PCMTD2Q9NV79 361 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 CACNA2D2Q9NY47 1150 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 PSD3Q9NYI0 1048 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 PKD2L2Q9NZM6 624 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 EHD2Q9NZN4 543 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 CARSP49589 748 aaKnown RBP14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 MTF1Q14872 753 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 PLEKHA8Q96JA3 519 aa14.26□□□□□ -0.13
CX3CL1-204ENST00000565912 MRPL1Q9BYD6 325 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms