RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 VIPR2P41587 438 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 LIFRP42702 1097 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 KARSQ15046 597 aaKnown RBP12.34□□□□□ -0.43
CAPN3-215ENST00000565559 UAP1L1Q3KQV9 507 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 ELMOD1Q8N336 334 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 KCNB2Q92953 911 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 RBM28Q9NW13 759 aaKnown RBP12.34□□□□□ -0.43
CAPN3-215ENST00000565559 PARP2Q9UGN5 583 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 CDY1Q9Y6F8 540 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 CNTNAP5Q8WYK1 1306 aa12.34□□□□□ -0.43
CAPN3-215ENST00000565559 NAV2Q8IVL1 2488 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 ARHGEF37A1IGU5 675 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 BCLAF3A2AJT9 711 aaKnown RBP12.33□□□□□ -0.44
CAPN3-215ENST00000565559 CASTOR2A6NHX0 329 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 ARNTLO00327 626 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 CHADO15335 359 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 MSH4O15457 936 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 ASAP2O43150 1006 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
CAPN3-215ENST00000565559 TSPAN1O60635 241 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 CD46P15529 392 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 CTHP32929 405 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 CIITAP33076 1130 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 HSPA4P34932 840 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 GCGRP47871 477 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 SOX9P48436 509 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 C19orf57Q0VDD7 668 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 CCINQ13939 588 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 KRT32Q14532 448 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 IQCEQ6IPM2 695 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 HAUS6Q7Z4H7 955 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 REXO1Q8N1G1 1221 aaKnown RBP12.33□□□□□ -0.44
CAPN3-215ENST00000565559 RNF149Q8NC42 400 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 GSTCDQ8NEC7 633 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 ZSCAN18Q8TBC5 510 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-215ENST00000565559 ZNF516Q92618 1163 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 TCEAL4Q96EI5 215 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 NXF3Q9H4D5 531 aaKnown RBP12.33□□□□□ -0.44
CAPN3-215ENST00000565559 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 TRPV4Q9HBA0 871 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 KLK14Q9P0G3 267 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 MTRRQ9UBK8 725 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 PCDHB3Q9Y5E6 796 aa12.33□□□□□ -0.44
CAPN3-215ENST00000565559 V9GY48 417 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-215ENST00000565559 BPTFQ12830 3046 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 MYBPHLA2RUH7 354 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 HEPACAM2A8MVW5 462 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 HOXC13P31276 330 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 SIM1P81133 766 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-215ENST00000565559 PON2Q15165 354 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 PLA2G4FQ68DD2 849 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 TXNDC11Q6PKC3 985 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 BLOC1S3Q6QNY0 202 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 CAMKK1Q8N5S9 505 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 LEMD2Q8NC56 503 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 ADAM32Q8TC27 787 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 TCP11Q8WWU5 503 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 TMEM143Q96AN5 459 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 LENG9Q96B70 501 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 CPB2Q96IY4 423 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 PAAF1Q9BRP4 392 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 GPR88Q9GZN0 384 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 DUSP15Q9H1R2 295 aaPredicted RBP12.32□□□□□ -0.44
CAPN3-215ENST00000565559 C6orf50Q9HD87 102 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 BACE2Q9Y5Z0 518 aa12.32□□□□□ -0.44
CAPN3-215ENST00000565559 SPAG17Q6Q759 2223 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 COL4A2P08572 1712 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 ADAMTS20P59510 1910 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 TICRRQ7Z2Z1 1910 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 INO80B-WBP1J3KQ70 363 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 STBD1O95210 358 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-215ENST00000565559 GBP1P32455 592 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 RFC5P40937 340 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 PSMC5P62195 406 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 ANKS3Q6ZW76 656 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 ANO5Q75V66 913 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 ZNF461Q8TAF7 563 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-215ENST00000565559 SLC5A5Q92911 643 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 ZSWIM3Q96MP5 696 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 PRR14Q9BWN1 585 aa12.31□□□□□ -0.44
CAPN3-215ENST00000565559 NOTCH4Q99466 2003 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 FAM221BA6H8Z2 402 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 NRG2O14511 850 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-215ENST00000565559 CDX4O14627 284 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-215ENST00000565559 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 DKC1O60832 514 aaKnown RBP eCLIP12.3□□□□□ -0.44
CAPN3-215ENST00000565559 NPTXRO95502 500 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 HMGB1P09429 215 aaKnown RBP12.3□□□□□ -0.44
CAPN3-215ENST00000565559 FGFR3P22607 806 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 GNA11P29992 359 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 CCR2P41597 374 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 KCNC4Q03721 635 aa12.3□□□□□ -0.44
CAPN3-215ENST00000565559 FCHO2Q0JRZ9 810 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms