RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 ENOSF1Q7L5Y1 443 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 EFL1Q7Z2Z2 1120 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 CDCA5Q96FF9 252 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CEP63Q96MT8 703 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TEPSINQ96N21 525 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TTYH3Q9C0H2 523 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 YY1AP1Q9H869 796 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PICK1Q9NRD5 415 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 KBTBD4Q9NVX7 518 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 GCNT4Q9P109 453 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ZFATQ9P243 1243 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 DNM3Q9UQ16 869 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 NAV1Q8NEY1 1877 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 FOXN3O00409 490 aaPredicted RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 KLHL41O60662 606 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ETS1P14921 441 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 HOXD10P28358 340 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SMARCA1P28370 1054 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 GJA5P36382 358 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ADCYAP1R1P41586 468 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TAF5Q15542 800 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ZNF618Q5T7W0 954 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SH3PXD2AQ5TCZ1 1133 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 POTEHQ6S545 545 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 CATSPER1Q8NEC5 780 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ETNPPLQ8TBG4 499 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SLC16A10Q8TF71 515 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 STARD8Q92502 1023 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 GLG1Q92896 1179 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TBK1Q9UHD2 729 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 FAM50BQ9Y247 325 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PFASO15067 1338 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 IGLV3-22A0A075B6J6 115 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TGFB1I1O43294 461 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 BMP10O95393 424 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ADRB2P07550 413 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PAMP19021 973 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PTGER2P43116 358 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SERPINB4P48594 390 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 AP3B2Q13367 1082 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 RINT1Q6NUQ1 792 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ATL2Q8NHH9 583 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SEMA4DQ92854 862 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SDCCAG3Q96C92 435 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SPAG5Q96R06 1193 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 RHOBTB2Q9BYZ6 727 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 THAP2Q9H0W7 228 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.56□□□□□ -1.84
CHD9-213ENST00000564845 NXF1Q9UBU9 619 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 HMGXB4Q9UGU5 601 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 TTC7AQ9ULT0 858 aaPredicted RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 ZNRF3Q9ULT6 936 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 FOCADQ5VW36 1801 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 KCNK3O14649 394 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 POLR2MP0CAP2 368 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 KRT3P12035 628 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 GAP43P17677 238 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 ATXN1P54253 815 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 HDLBPQ00341 1268 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 SPIRE1Q08AE8 756 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 STRN3Q13033 797 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PAK2Q13177 524 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SEL1L2Q5TEA6 688 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 SLFN12LQ6IEE8 588 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 C12orf29Q8N999 325 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 MRPL48Q96GC5 212 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 DDX50Q9BQ39 737 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 UNKQ9C0B0 810 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 ANKZF1Q9H8Y5 726 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 KRCC1Q9NPI7 259 aaPredicted RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 NUDT5Q9UKK9 219 aa3.56□□□□□ -1.84
CHD9-213ENST00000564845 PDS5AQ29RF7 1337 aaKnown RBP3.56□□□□□ -1.84
CHD9-213ENST00000564845 VIL1P09327 827 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 OGNP20774 298 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 AKAP5P24588 427 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 SFNP31947 248 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ZNF571Q7Z3V5 609 aaPredicted RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 PARP9Q8IXQ6 854 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 DAW1Q8N136 415 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 TIGD1Q96MW7 591 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CENPKQ9BS16 269 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 OXCT2Q9BYC2 517 aaPredicted RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 RBM12Q9NTZ6 932 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 SAMD15Q9P1V8 674 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 UTP11Q9Y3A2 253 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 RBM47A0AV96 593 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 TMEM247A6NEH6 219 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 QSOX1O00391 747 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 SEMA3DO95025 777 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 GCLCP48506 637 aaPredicted RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 PGM5Q15124 567 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 ERICH1Q86X53 443 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 KRT12Q99456 494 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 IFIH1Q9BYX4 1025 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 ERVK-5Q9HDB9 667 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 DNPEPQ9ULA0 475 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 POLIQ9UNA4 740 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 KRT20P35900 424 aa3.55□□□□□ -1.84
CHD9-213ENST00000564845 CLK2P49760 499 aaKnown RBP3.55□□□□□ -1.84
CHD9-213ENST00000564845 MESDQ14696 234 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms