RNA–Protein interactions for RNA: ENST00000564580.5

RRN3P2-202, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 2, humanhuman

TSL 1 (best) BASIC

Gene RRN3P2, Length 2,132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P2-202ENST00000564580 LILRA4P59901 499 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 MCCD1P59942 119 aaPredicted RBP12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 CCDC85BQ15834 202 aaPredicted RBP12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 TIGD5Q53EQ6 642 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 C1orf220Q5T0J3 134 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 FAM171A1Q5VUB5 890 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 KIAA0319Q5VV43 1072 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 PDE12Q6L8Q7 609 aaKnown RBP12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 FAM186BQ8IYM0 893 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 MICALL1Q8N3F8 863 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 CSGALNACT2Q8N6G5 542 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 CGRRF1Q99675 332 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 SIX4Q9UIU6 781 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 RWDD2AQ9UIY3 292 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 STXBP5LQ9Y2K9 1186 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 NUB1Q9Y5A7 615 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 IRAK3Q9Y616 596 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 TRAPPC3O43617 180 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 LILRB3O75022 631 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 CXCL14O95715 111 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 ITGB3P05106 788 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 TMEM191BP0C7N4 346 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 AARSP49588 968 aaKnown RBP eCLIP12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 PTPN14Q15678 1187 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 USP41Q3LFD5 358 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 RTP2Q5QGT7 225 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 PLPP4Q5VZY2 271 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 INTS8Q75QN2 995 aaKnown RBP12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 ADGRD2Q7Z7M1 963 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 TMC2Q8TDI7 906 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 MKNK1Q9BUB5 465 aa12.34□□□□□ -0.43
RRN3P2-202ENST00000564580 KIAA1671Q9BY89 1806 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 C2CD2LO14523 706 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 IKBKBO14920 756 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 PTMSP20962 102 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 FGFR3P22607 806 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 POLR2BP30876 1174 aaKnown RBP12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 VAMP7P51809 220 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 DSG1Q02413 1049 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 ELAVL2Q12926 359 aaKnown RBP12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 TCEAL5Q5H9L2 206 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 KIAA1841Q6NSI8 718 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 TRAPPC11Q7Z392 1133 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 RBM23Q86U06 439 aaKnown RBP12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 ANKRD36BP1Q96IX9 119 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 TTPALQ9BTX7 342 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 HERC2P3Q9BVR0 1158 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 NSUN3Q9H649 340 aaKnown RBP12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 MRPL17Q9NRX2 175 aaKnown RBP12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 ITGA11Q9UKX5 1188 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 AGAP1Q9UPQ3 857 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 RALGAPA2Q2PPJ7 1873 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 CITO14578 2027 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 NLRC5Q86WI3 1866 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 TRIP11Q15643 1979 aa12.33□□□□□ -0.44
RRN3P2-202ENST00000564580 PER2O15055 1255 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 CST3P01034 146 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 GLUD2P49448 558 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 BFSP1Q12934 665 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 CEP57Q86XR8 500 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 PPM1EQ8WY54 764 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 SUSD3Q96L08 255 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 CEP63Q96MT8 703 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 M0QZQ0 153 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 TNNC2P02585 160 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 URODP06132 367 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 KRT19P08727 400 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 TRIM49P0CI25 452 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 TRIM49CP0CI26 452 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 ERCC5P28715 1186 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 TKTP29401 623 aaKnown RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 NRIP1P48552 1158 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 RBP5P82980 135 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 BMS1Q14692 1282 aaKnown RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 NFKBIBQ15653 356 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 SASS6Q6UVJ0 657 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 FILIP1Q7Z7B0 1213 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 MAFAQ8NHW3 353 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 RIN2Q8WYP3 895 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 SRRTQ9BXP5 876 aaKnown RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 TLE6Q9H808 572 aa12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 TDRD15B5MCY1 1934 aaKnown RBP12.32□□□□□ -0.44
RRN3P2-202ENST00000564580 C5orf42Q9H799 3197 aa12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 KPNA7A9QM74 516 aa12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 C4BPAP04003 597 aaKnown RBP12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 CNPP09543 421 aaKnown RBP12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 KRT13P13646 458 aa12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 CA8P35219 290 aa12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 AP3M2P53677 418 aa12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 ENPEPQ07075 957 aa12.31□□□□□ -0.44
RRN3P2-202ENST00000564580 PPP3CAQ08209 521 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms