RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 EXOSC9Q06265 439 aaKnown RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 MRPL49Q13405 166 aaKnown RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZACNQ401N2 412 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 VWA3BQ502W6 1294 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CCDC70Q6NSX1 233 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 LVRNQ6Q4G3 990 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 MPZL3Q6UWV2 235 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZNF783Q6ZMS7 281 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 FANCBQ8NB91 859 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 GCDHQ92947 438 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZNF566Q969W8 418 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 RMDN3Q96TC7 470 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CDC5LQ99459 802 aaKnown RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 SGPP1Q9BX95 441 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TMEM120AQ9BXJ8 343 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZNF518BQ9C0D4 1074 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 GPR35Q9HC97 309 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 GJD2Q9UKL4 321 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZMYM3Q14202 1370 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 HMGB1P1B2RPK0 211 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 GRM6O15303 877 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 PJA2O43164 708 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TBC1D4O60343 1298 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 MT-ND5P03915 603 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZNF888P0CJ79 500 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 IL1R1P14778 569 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 VEGFAP15692 232 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 KLRC1P26715 233 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CASRP41180 1078 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 PTH1RQ03431 593 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 FOXO1Q12778 655 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 FSTL1Q12841 308 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 PPFIA1Q13136 1202 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TBR1Q16650 682 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CCDC93Q567U6 631 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 AFMIDQ63HM1 303 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TMEM132EQ6IEE7 984 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CLEC4GQ6UXB4 293 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 MMS22LQ6ZRQ5 1243 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ADGRE4PQ86SQ3 457 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 PDSS2Q86YH6 399 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZNF527Q8NB42 609 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZNF384Q8TF68 577 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CCT6BQ92526 530 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TBC1D20Q96BZ9 403 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 MBD6Q96DN6 1003 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 BORCS6Q96GS4 357 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TBATAQ96M53 351 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 SPATA25Q9BR10 227 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 NDC1Q9BTX1 674 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 L2HGDHQ9H9P8 463 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 KCNK12Q9HB15 430 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TMEM8AQ9HCN3 771 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 JKAMPQ9P055 326 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.1□□□□□ -1.91
CHD9-209ENST00000564255 CXorf49A8MYA2 514 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 SYT5O00445 386 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 NPC1O15118 1278 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 SKAP2O75563 359 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 ANXA1P04083 346 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 SRGNP10124 158 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 TXNP10599 105 aaKnown RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 SLC6A4P31645 630 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 BPIFB4P59827 614 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 GALNT1Q10472 559 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 DUSP8Q13202 625 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CTBP1Q13363 440 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 PTK2BQ14289 1009 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 HABP2Q14520 560 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 MAPRE1Q15691 268 aaKnown RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 ATP2B3Q16720 1220 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 ZMAT1Q5H9K5 638 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 BEND5Q7L4P6 421 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 IL17REQ8NFR9 667 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 FBXO18Q8NFZ0 1043 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 CFHR4Q92496 578 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 PPP1R16BQ96T49 567 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 GPHA2Q96T91 129 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 MYLK2Q9H1R3 596 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 BRD9Q9H8M2 597 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 SLC39A10Q9ULF5 831 aa3.1□□□□□ -1.91
CHD9-209ENST00000564255 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.1□□□□□ -1.91
CHD9-209ENST00000564255 A0A087WWL8 130 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 M0R3H8 397 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 ARHGAP6O43182 974 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 THAP12O43422 761 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 MYL4P12829 197 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 GABRB3P28472 473 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 GZMKP49863 264 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 TCF15Q12870 199 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 PFKFB4Q16877 469 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 FAM26FQ5R3K3 315 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 TXLNBQ8N3L3 684 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 VGLL2Q8N8G2 317 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 FBXO15Q8NCQ5 510 aaPredicted RBP3.09□□□□□ -1.91
CHD9-209ENST00000564255 TNPO1Q92973 898 aaKnown RBP3.09□□□□□ -1.91
CHD9-209ENST00000564255 IQCDQ96DY2 449 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 SIGLEC10Q96LC7 697 aa3.09□□□□□ -1.91
CHD9-209ENST00000564255 DIRC2Q96SL1 478 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms