RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 C1orf127Q8N9H9 656 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 BEST2Q8NFU1 509 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 LNX1Q8TBB1 728 aaPredicted RBP9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 PLEKHO2Q8TD55 490 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 MICAL1Q8TDZ2 1067 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 SLC22A17Q8WUG5 538 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 PPM1EQ8WY54 764 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 FAM212AQ96EL1 285 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 SUSD3Q96L08 255 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 B3GALT6Q96L58 329 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 MFSD14AQ96MC6 490 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 KLHL5Q96PQ7 755 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 TTPALQ9BTX7 342 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 CLSTN2Q9H4D0 955 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 UBE2ZQ9H832 354 aaPredicted RBP9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 MRPL17Q9NRX2 175 aaKnown RBP9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 CLEC1BQ9P126 229 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 THEGQ9P2T0 379 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 MAPK8IP1Q9UQF2 711 aa9.55□□□□□ -0.88
NSMCE1-206ENST00000563900 BDP1A6H8Y1 2624 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 SYN3O14994 580 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 PER2O15055 1255 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 MAPK13O15264 365 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 SPTLC1O15269 473 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 TEX28O15482 410 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 CALUO43852 315 aaPredicted RBP9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 TBC1D4O60343 1298 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 EXOC3O60645 756 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 PAPLNO95428 1278 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 CXCL14O95715 111 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 CD44P16070 742 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 PAX3P23760 479 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 TKTP29401 623 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 CASP4P49662 377 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 PMS1P54277 932 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 DLX2Q07687 328 aaPredicted RBP9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 SURF1Q15526 300 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 EDRF1Q3B7T1 1238 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 FAM171A1Q5VUB5 890 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 SCARA3Q6AZY7 606 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 FOXR2Q6PJQ5 311 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 RBM23Q86U06 439 aaKnown RBP9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 WDR49Q8IV35 697 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 OR5B17Q8NGF7 314 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 GPT2Q8TD30 523 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 HLA-CQ95604 372 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 BORCS6Q96GS4 357 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 MSLNLQ96KJ4 702 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 FAM84AQ96KN4 292 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 TLE6Q9H808 572 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 INTS13Q9NVM9 706 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 DPP3Q9NY33 737 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 KIAA1468Q9P260 1216 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 FNIP2Q9P278 1114 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 MTRRQ9UBK8 725 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 SIX4Q9UIU6 781 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 SSX2IPQ9Y2D8 614 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 BACE2Q9Y5Z0 518 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 HCFC2Q9Y5Z7 792 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 TSC2P49815 1807 aa9.54□□□□□ -0.88
NSMCE1-206ENST00000563900 PPP1R3GB7ZBB8 358 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 I3L4J1 428 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 TRAPPC3O43617 180 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 AKAP3O75969 853 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 NR2F2P24468 414 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 CLCN4P51793 760 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 LILRA4P59901 499 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 RBM10P98175 930 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 CREMQ03060 361 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 ENPEPQ07075 957 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 GSE1Q14687 1217 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 LEXMQ3ZCV2 418 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 C1orf220Q5T0J3 134 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 SLC8B1Q6J4K2 584 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 LILRA6Q6PI73 481 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 RSPO2Q6UXX9 243 aaPredicted RBP9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 LRRC52Q8N7C0 313 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 TRIML1Q8N9V2 468 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 PARD3BQ8TEW8 1205 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 ATXN2LQ8WWM7 1075 aaKnown RBP9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 RIN2Q8WYP3 895 aaPredicted RBP9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 CGRRF1Q99675 332 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 CLSTN3Q9BQT9 956 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 EMILIN2Q9BXX0 1053 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 MTMR12Q9C0I1 747 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 CLDND1Q9NY35 253 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 ITGA11Q9UKX5 1188 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 PCDHB8Q9UN66 801 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 NUB1Q9Y5A7 615 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 PLXNA3P51805 1871 aa9.53□□□□□ -0.88
NSMCE1-206ENST00000563900 LRRIQ3A6PVS8 624 aaPredicted RBP9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 C2CD2LO14523 706 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 ADAM12O43184 909 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 OAZ2O95190 189 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 ITGB3P05106 788 aa9.52□□□□□ -0.89
NSMCE1-206ENST00000563900 CYP11A1P05108 521 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms