RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 FAM13AO94988 1023 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 OAZ2O95190 189 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 RHOP08100 348 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 PTPN2P17706 415 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 ELF1P32519 619 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 MCM4P33991 863 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 DDIT3P35638 169 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 LIG4P49917 911 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 STARD6P59095 220 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 CTXN3Q4LDR2 81 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 ZNF280DQ6N043 979 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 MAP4K3Q8IVH8 894 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 CD302Q8IX05 232 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 LARP4BQ92615 738 aaKnown RBP18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 BICD1Q96G01 975 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 TBC1D17Q9HA65 648 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 CA14Q9ULX7 337 aa18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 MORC2Q9Y6X9 1032 aaPredicted RBP18.75■□□□□ 0.59
VPS9D1-203ENST00000563798 K7ENM7 598 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 XPOTO43592 962 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 GFRA3O60609 400 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 LRG1P02750 347 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 PAX3P23760 479 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 TNFSF9P41273 254 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 GPC5P78333 572 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 PPP2R3AQ06190 1150 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 ENOX2Q16206 610 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 BEST2Q8NFU1 509 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 DLGAP2Q9P1A6 1054 aa18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 AFF4Q9UHB7 1163 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 MRPS23Q9Y3D9 190 aaKnown RBP18.74■□□□□ 0.59
VPS9D1-203ENST00000563798 LACTBL1A8MY62 500 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 PRRG1O14668 218 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 ECI2O75521 394 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 SEC24AO95486 1093 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 MATR3P43243 847 aaKnown RBP eCLIP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 POU5F1Q01860 360 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 DHX8Q14562 1220 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 SLC5A9Q2M3M2 681 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 PRSS36Q5K4E3 855 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 SLC39A4Q6P5W5 647 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 KIF12Q96FN5 646 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 INTS4Q96HW7 963 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 SHDQ96IW2 340 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 DDX23Q9BUQ8 820 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 RPF1Q9H9Y2 349 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 CYP4F11Q9HBI6 524 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 STK17AQ9UEE5 414 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 FBXO2Q9UK22 296 aaPredicted RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 CPSF3Q9UKF6 684 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 SRPRBQ9Y5M8 271 aaKnown RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 INSL5Q9Y5Q6 135 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 CLIC4Q9Y696 253 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 STYXL1Q9Y6J8 313 aa18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 ZFHX2Q9C0A1 2572 aaPredicted RBP18.73■□□□□ 0.59
VPS9D1-203ENST00000563798 VPS37CA5D8V6 355 aaPredicted RBP18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 TBCAO75347 108 aaKnown RBP18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 KRT18P05783 430 aaKnown RBP18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 MARCKSP29966 332 aaPredicted RBP18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 SPAG1Q07617 926 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 RESTQ13127 1097 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 ANGPT1Q15389 498 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 ZBTB41Q5SVQ8 909 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 SPATA1Q5VX52 437 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 POTEHQ6S545 545 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 USP49Q70CQ1 688 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 RASSF8Q8NHQ8 419 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 EPSTI1Q96J88 318 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 MSTO1Q9BUK6 570 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 DERAQ9Y315 318 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 SIT1Q9Y3P8 196 aa18.72■□□□□ 0.59
VPS9D1-203ENST00000563798 ZNF197O14709 1029 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 TYMPP19971 482 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 SYT1P21579 422 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 NMT1P30419 496 aaKnown RBP18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 EPHA5P54756 1037 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 ARPP19P56211 112 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 PFKPQ01813 784 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 PRKCQQ04759 706 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 YWHAHQ04917 246 aaPredicted RBP18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 SLFN12LQ6IEE8 588 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 KRI1Q8N9T8 703 aaKnown RBP18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 LEMD2Q8NC56 503 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 ST13P5Q8NFI4 369 aaPredicted RBP18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 HVCN1Q96D96 273 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 STRA6Q9BX79 667 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 ASB7Q9H672 318 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 CCDC39Q9UFE4 941 aa18.71■□□□□ 0.59
VPS9D1-203ENST00000563798 MYH15Q9Y2K3 1946 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 PRR23AA6NEV1 266 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 OR6C75A6NL08 312 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 STK25O00506 426 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 PPP1R37O75864 691 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 ADCY1Q08828 1119 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 ZNF720Q7Z2F6 126 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 PJA1Q8NG27 643 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 ING5Q8WYH8 240 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 ELSPBP1Q96BH3 223 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 MCRS1Q96EZ8 462 aa18.7■□□□□ 0.58
VPS9D1-203ENST00000563798 OSBPL6Q9BZF3 934 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms