RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 CCDC39Q9UFE4 941 aa5.75□□□□□ -1.49
HERPUD1-207ENST00000563781 USP25Q9UHP3 1055 aa5.75□□□□□ -1.49
HERPUD1-207ENST00000563781 TUBE1Q9UJT0 475 aa5.75□□□□□ -1.49
HERPUD1-207ENST00000563781 MSRB2Q9Y3D2 182 aa5.75□□□□□ -1.49
HERPUD1-207ENST00000563781 SMIM35A0A1B0GVV1 85 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 FRMD3A2A2Y4 597 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 RSPH10B2B2RC85 870 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 GOLGA6L22H0YM25 854 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 MAGEB2O15479 319 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 KLRC4O43908 158 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 B4GALT4O60513 344 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 ADAM11O75078 769 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 CD4P01730 458 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 RSPH10BP0C881 870 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 GNAT1P11488 350 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 CYP2C9P11712 490 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 ARL2P36404 184 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 ZNF131P52739 623 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 POLGP54098 1239 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 RTP1P59025 263 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TLE2Q04725 743 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 CUL4BQ13620 913 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 GIT2Q14161 759 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 ADGRE1Q14246 886 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 NFKBIBQ15653 356 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 SV2BQ7L1I2 683 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 ANKRD33Q7Z3H0 272 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 RPAINQ86UA6 219 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 EXOC8Q8IYI6 725 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 CEP57L1Q8IYX8 460 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 KIAA0319LQ8IZA0 1049 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TMEM130Q8N3G9 435 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 LRRC71Q8N4P6 559 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 CNNM3Q8NE01 707 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TMEM143Q96AN5 459 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 PAGE5Q96GU1 130 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TIGD1Q96MW7 591 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 FIZ1Q96SL8 496 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 C7orf25Q9BPX7 421 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 PYM1Q9BRP8 204 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 SEZ6LQ9BYH1 1024 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TRIM55Q9BYV6 548 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TRIM9Q9C026 710 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 CCDC113Q9H0I3 377 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 MRPL18Q9H0U6 180 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TNMDQ9H2S6 317 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 ATP6V0A4Q9HBG4 840 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 POLD4Q9HCU8 107 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 GPRC5CQ9NQ84 441 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 GEMIN8Q9NWZ8 242 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 PCDHA2Q9Y5H9 948 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TCHHQ07283 1943 aa5.74□□□□□ -1.49
HERPUD1-207ENST00000563781 TNRC18O15417 2968 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 GAS2O43903 313 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 EIF4EBP3O60516 100 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 PQBP1O60828 265 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 KINO60870 393 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 HIP1RO75146 1068 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 WISP1O95388 367 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 MBD3O95983 291 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 VTNP04004 478 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 S100BP04271 92 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 GLRA2P23416 452 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 ETFBP38117 255 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 AFMP43652 599 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 NLRP12P59046 1061 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 NRG1Q02297 640 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 GSTM4Q03013 218 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 MGAT3Q09327 533 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 CAPSQ13938 189 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 POSTNQ15063 836 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 PTGISQ16647 500 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 FAM102BQ5T8I3 360 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 EFCAB12Q6NXP0 572 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 TAF2Q6P1X5 1199 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 MAEAQ7L5Y9 396 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 DYMQ7RTS9 669 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 ELOA2Q8IYF1 753 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 MCPH1Q8NEM0 835 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 SPATA20Q8TB22 786 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 DNAJB3Q8WWF6 145 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 RELTQ969Z4 430 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 CCDC43Q96MW1 224 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 TOX2Q96NM4 488 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 JPH2Q9BR39 696 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 REEP2Q9BRK0 252 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 TIPINQ9BVW5 301 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 FGFBP2Q9BYJ0 223 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 NRSN2Q9GZP1 204 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 POLR3FQ9H1D9 316 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 BLZF1Q9H2G9 400 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 ADAMTS10Q9H324 1103 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 CLSTN2Q9H4D0 955 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 KCND2Q9NZV8 630 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 SUCLA2Q9P2R7 463 aaPredicted RBP5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 PRKAG3Q9UGI9 489 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 ADAMTS1Q9UHI8 967 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 TBX21Q9UL17 535 aa5.73□□□□□ -1.49
HERPUD1-207ENST00000563781 PPM1HQ9ULR3 514 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms