RNA–Protein interactions for RNA: ENST00000563525.2

USP31-202, Transcript of ubiquitin specific peptidase 31, humanhuman

TSL 5

Gene USP31, Length 1,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-202ENST00000563525 FAM186BQ8IYM0 893 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 PPM1EQ8WY54 764 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 ZNF516Q92618 1163 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 FNBP1Q96RU3 617 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 CGRRF1Q99675 332 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 HERC2P3Q9BVR0 1158 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 STXBP5LQ9Y2K9 1186 aa13.24□□□□□ -0.29
USP31-202ENST00000563525 SF3B1O75533 1304 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP31-202ENST00000563525 PIRO00625 290 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 CETN3O15182 167 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 TKTP29401 623 aaKnown RBP13.23□□□□□ -0.29
USP31-202ENST00000563525 POLR2BP30876 1174 aaKnown RBP13.23□□□□□ -0.29
USP31-202ENST00000563525 CA8P35219 290 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 GTF2F1P35269 517 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP31-202ENST00000563525 PSMC2P35998 433 aaKnown RBP13.23□□□□□ -0.29
USP31-202ENST00000563525 FKBP3Q00688 224 aaKnown RBP13.23□□□□□ -0.29
USP31-202ENST00000563525 SURF1Q15526 300 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 KLHL40Q2TBA0 621 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 TIGD5Q53EQ6 642 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 TCEAL5Q5H9L2 206 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 FAM171A1Q5VUB5 890 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
USP31-202ENST00000563525 MLKLQ8NB16 471 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 BORCS6Q96GS4 357 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 NSUN3Q9H649 340 aaKnown RBP13.23□□□□□ -0.29
USP31-202ENST00000563525 CHST7Q9NS84 486 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 NUB1Q9Y5A7 615 aa13.23□□□□□ -0.29
USP31-202ENST00000563525 UNC80Q8N2C7 3258 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 SCN1AP35498 2009 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.22□□□□□ -0.29
USP31-202ENST00000563525 C2orf71A6NGG8 1288 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 PER2O15055 1255 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 MAPK13O15264 365 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 CXCL14O95715 111 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 TRIM49P0CI25 452 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 TRIM49CP0CI26 452 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
USP31-202ENST00000563525 CLDN10P78369 228 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 SMC1AQ14683 1233 aaKnown RBP13.22□□□□□ -0.29
USP31-202ENST00000563525 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 USP41Q3LFD5 358 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 TRAPPC11Q7Z392 1133 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 CEP57Q86XR8 500 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 CSGALNACT2Q8N6G5 542 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 MRPL43Q8N983 215 aaKnown RBP13.22□□□□□ -0.29
USP31-202ENST00000563525 MAFAQ8NHW3 353 aaPredicted RBP13.22□□□□□ -0.29
USP31-202ENST00000563525 CACTINQ8WUQ7 758 aaKnown RBP13.22□□□□□ -0.29
USP31-202ENST00000563525 ANKRD36BP1Q96IX9 119 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 NGRNQ9NPE2 291 aaKnown RBP13.22□□□□□ -0.29
USP31-202ENST00000563525 AGAP1Q9UPQ3 857 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 VWA8A3KMH1 1905 aa13.22□□□□□ -0.29
USP31-202ENST00000563525 BICDL2A1A5D9 508 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 LILRB3O75022 631 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 URODP06132 367 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 KRT19P08727 400 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 EPB41P11171 864 aaKnown RBP13.21□□□□□ -0.29
USP31-202ENST00000563525 FGFR3P22607 806 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 GLUD2P49448 558 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 VAMP7P51809 220 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 LILRA4P59901 499 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 DSG1Q02413 1049 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 HYAL1Q12794 435 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 BFSP1Q12934 665 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 KIAA0319Q5VV43 1072 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
USP31-202ENST00000563525 PRSS55Q6UWB4 352 aaPredicted RBP13.21□□□□□ -0.29
USP31-202ENST00000563525 INTS8Q75QN2 995 aaKnown RBP13.21□□□□□ -0.29
USP31-202ENST00000563525 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.29
USP31-202ENST00000563525 SUSD3Q96L08 255 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 TTPALQ9BTX7 342 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 MKNK1Q9BUB5 465 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 RWDD2AQ9UIY3 292 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 ITGA11Q9UKX5 1188 aa13.21□□□□□ -0.29
USP31-202ENST00000563525 TIMM13Q9Y5L4 95 aaPredicted RBP13.21□□□□□ -0.29
USP31-202ENST00000563525 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.21□□□□□ -0.29
USP31-202ENST00000563525 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 TNNC2P02585 160 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 CNPP09543 421 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 RPL17P18621 184 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 NRIP1P48552 1158 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 PPP3CAQ08209 521 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 ELAVL2Q12926 359 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 NFKBIBQ15653 356 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 PDE12Q6L8Q7 609 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 KIAA1841Q6NSI8 718 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 C11orf57Q6ZUT1 292 aaPredicted RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 ELMO3Q96BJ8 720 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 SRRTQ9BXP5 876 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 IGFLR1Q9H665 355 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 MMRN2Q9H8L6 949 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 MRPL17Q9NRX2 175 aaKnown RBP13.2□□□□□ -0.3
USP31-202ENST00000563525 STK39Q9UEW8 545 aa13.2□□□□□ -0.3
USP31-202ENST00000563525 IRAK3Q9Y616 596 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms